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elxDeformationFieldTransform.h
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1 /*=========================================================================
2  *
3  * Copyright UMC Utrecht and contributors
4  *
5  * Licensed under the Apache License, Version 2.0 (the "License");
6  * you may not use this file except in compliance with the License.
7  * You may obtain a copy of the License at
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9  * http://www.apache.org/licenses/LICENSE-2.0.txt
10  *
11  * Unless required by applicable law or agreed to in writing, software
12  * distributed under the License is distributed on an "AS IS" BASIS,
13  * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14  * See the License for the specific language governing permissions and
15  * limitations under the License.
16  *
17  *=========================================================================*/
18 #ifndef __elxDeformationFieldTransform_H__
19 #define __elxDeformationFieldTransform_H__
20 
21 #include "elxIncludes.h" // include first to avoid MSVS warning
24 
25 namespace elastix
26 {
27 
53 template< class TElastix >
55  public
57  typename elx::TransformBase< TElastix >::CoordRepType,
58  elx::TransformBase< TElastix >::FixedImageDimension >,
59  public
60  TransformBase< TElastix >
61 {
62 public:
63 
66 
73 
77 
79 
80  typedef itk::SmartPointer< Self > Pointer;
81  typedef itk::SmartPointer< const Self > ConstPointer;
82 
84  itkNewMacro( Self );
85 
88 
93  elxClassNameMacro( "DeformationFieldTransform" );
94 
96  itkStaticConstMacro( SpaceDimension, unsigned int, Superclass2::FixedImageDimension );
97 
111 
115 
118 
131 
133  void ReadFromFile( void ) override;
134 
136  void WriteToFile( const ParametersType & param ) const override;
137 
138 protected:
139 
144 
145 private:
146 
148  DeformationFieldTransform( const Self & ); // purposely not implemented
150  void operator=( const Self & ); // purposely not implemented
151 
152  typedef typename DeformationFieldType::DirectionType DirectionType;
153 
157 
160 
161 };
162 
163 } // end namespace elastix
164 
165 #ifndef ITK_MANUAL_INSTANTIATION
166 #include "elxDeformationFieldTransform.hxx"
167 #endif
168 
169 #endif // end #ifndef __elxDeformationFieldTransform_H__
A class that deals with user given parameters and command line arguments.
A transform based on a DeformationField.
Superclass1::InputVnlVectorType InputVnlVectorType
elxClassNameMacro("DeformationFieldTransform")
Superclass1::NumberOfParametersType NumberOfParametersType
DeformationFieldType::DirectionType DirectionType
Superclass1::OutputVectorType OutputVectorType
DeformationFieldInterpolatingTransformType::Pointer DeformationFieldInterpolatingTransformPointer
DeformationFieldInterpolatingTransformType::DeformationFieldType DeformationFieldType
void WriteToFile(const ParametersType &param) const override
elx::TransformBase< TElastix > Superclass2
Superclass1::OutputCovariantVectorType OutputCovariantVectorType
DeformationFieldInterpolatingTransformPointer m_DeformationFieldInterpolatingTransform
Superclass1::InputCovariantVectorType InputCovariantVectorType
void ReadFromFile(void) override
Superclass2::RegistrationPointer RegistrationPointer
itk::DeformationFieldInterpolatingTransform< typename elx::TransformBase< TElastix >::CoordRepType, elx::TransformBase< TElastix >::FixedImageDimension, float > DeformationFieldInterpolatingTransformType
itkStaticConstMacro(SpaceDimension, unsigned int, Superclass2::FixedImageDimension)
Superclass2::CombinationTransformType CombinationTransformType
Superclass1::OutputVnlVectorType OutputVnlVectorType
itk::AdvancedCombinationTransform< typename elx::TransformBase< TElastix >::CoordRepType, elx::TransformBase< TElastix >::FixedImageDimension > Superclass1
Superclass2::ConfigurationType ConfigurationType
Superclass2::RegistrationType RegistrationType
DeformationFieldInterpolatingTransformType::DeformationFieldVectorType DeformationFieldVectorType
Superclass2::ConfigurationPointer ConfigurationPointer
itk::SmartPointer< const Self > ConstPointer
This class is the elastix base class for all Transforms.
Configuration::Pointer ConfigurationPointer
ElastixType::FixedImageType FixedImageType
itk::WeakPointer< ElastixType > ElastixPointer
RegistrationType * RegistrationPointer
ElastixType::MovingImageType MovingImageType
ElastixType::CoordRepType CoordRepType
ElastixType::RegistrationBaseType RegistrationType
This class combines two transforms: an 'initial transform' with a 'current transform'.
Superclass::InputCovariantVectorType InputCovariantVectorType
Superclass::OutputVnlVectorType OutputVnlVectorType
Superclass::OutputCovariantVectorType OutputCovariantVectorType
Superclass::NumberOfParametersType NumberOfParametersType
Superclass::InputVnlVectorType InputVnlVectorType
Transform maps points, vectors and covariant vectors from an input space to an output space.
Superclass::ParametersType ParametersType
Transform that interpolates a given deformation field.
Vector< DeformationFieldComponentType, itkGetStaticConstMacro(OutputSpaceDimension) > DeformationFieldVectorType
Image< DeformationFieldVectorType, itkGetStaticConstMacro(InputSpaceDimension) > DeformationFieldType


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