Everything
All Classes
buffer
rdkit.Chem.BuildFragmentCatalog.RunDetails
rdkit.Chem.ChemUtils.SDFToCSV.TestCase
rdkit.Chem.DSViewer.Displayable
rdkit.Chem.DSViewer.MolViewer
rdkit.Chem.Draw.MolDrawing.DrawingOptions
rdkit.Chem.Draw.MolDrawing.Font
rdkit.Chem.Draw.MolDrawing.MolDrawing
rdkit.Chem.Draw.aggCanvas.Canvas
rdkit.Chem.Draw.cairoCanvas.Canvas
rdkit.Chem.Draw.canvasbase.CanvasBase
rdkit.Chem.Draw.mplCanvas.Canvas
rdkit.Chem.Draw.qtCanvas.Canvas
rdkit.Chem.Draw.spingCanvas.Canvas
rdkit.Chem.FastSDMolSupplier.FastSDMolSupplier
rdkit.Chem.FeatMaps.FeatMapParser.FeatMapParseError
rdkit.Chem.FeatMaps.FeatMapParser.FeatMapParser
rdkit.Chem.FeatMaps.FeatMapPoint.FeatMapPoint
rdkit.Chem.FeatMaps.FeatMapUtils.DirMergeMode
rdkit.Chem.FeatMaps.FeatMapUtils.MergeMethod
rdkit.Chem.FeatMaps.FeatMapUtils.MergeMetric
rdkit.Chem.FeatMaps.FeatMaps.FeatDirScoreMode
rdkit.Chem.FeatMaps.FeatMaps.FeatMap
rdkit.Chem.FeatMaps.FeatMaps.FeatMapParams
rdkit.Chem.FeatMaps.FeatMaps.FeatMapParams.FeatProfile
rdkit.Chem.FeatMaps.FeatMaps.FeatMapScoreMode
rdkit.Chem.FilterCatalog.FilterMatcher
rdkit.Chem.Fingerprints.DbFpSupplier.DbFpSupplier
rdkit.Chem.Fingerprints.DbFpSupplier.ForwardDbFpSupplier
rdkit.Chem.Fingerprints.DbFpSupplier.RandomAccessDbFpSupplier
rdkit.Chem.Fingerprints.FingerprintMols.FingerprinterDetails
rdkit.Chem.Fingerprints.SimilarityScreener.SimilarityScreener
rdkit.Chem.Fingerprints.SimilarityScreener.ThresholdScreener
rdkit.Chem.Fingerprints.SimilarityScreener.TopNScreener
rdkit.Chem.FragmentCatalog.BitGainsInfo
rdkit.Chem.FragmentMatcher.FragmentMatcher
rdkit.Chem.FunctionalGroups.FGHierarchyNode
rdkit.Chem.FunctionalGroups.FuncGroupFileParseError
rdkit.Chem.MolDb.FingerprintUtils.LayeredOptions
rdkit.Chem.MolDb.Loader_sa.Compound
rdkit.Chem.MolKey.InchiInfo.InchiInfo
rdkit.Chem.MolKey.InchiInfo.TestInchiInfo
rdkit.Chem.MolKey.MolKey.BadMoleculeException
rdkit.Chem.MolKey.MolKey.MolIdentifierException
rdkit.Chem.Pharm2D.LazyGenerator.Generator
rdkit.Chem.Pharm2D.Matcher.MatchError
rdkit.Chem.Pharm2D.SigFactory.SigFactory
rdkit.Chem.Pharm3D.ExcludedVolume.ExcludedVolume
rdkit.Chem.Pharm3D.Pharmacophore.ExplicitPharmacophore
rdkit.Chem.Pharm3D.Pharmacophore.Pharmacophore
rdkit.Chem.PropertyMol.PropertyMol
rdkit.Chem.PyMol.MolViewer
rdkit.Chem.Recap.RecapHierarchyNode
rdkit.Chem.SaltRemover.SaltRemover
rdkit.Chem.Subshape.SubshapeAligner.SubshapeAligner
rdkit.Chem.Subshape.SubshapeAligner.SubshapeAlignment
rdkit.Chem.Subshape.SubshapeAligner.SubshapeDistanceMetric
rdkit.Chem.Subshape.SubshapeBuilder.SubshapeBuilder
rdkit.Chem.Subshape.SubshapeBuilder.SubshapeCombineOperations
rdkit.Chem.Subshape.SubshapeObjects.ShapeWithSkeleton
rdkit.Chem.Subshape.SubshapeObjects.SkeletonPoint
rdkit.Chem.Subshape.SubshapeObjects.SubshapeShape
rdkit.Chem.Suppliers.DbMolSupplier.DbMolSupplier
rdkit.Chem.Suppliers.DbMolSupplier.ForwardDbMolSupplier
rdkit.Chem.Suppliers.DbMolSupplier.RandomAccessDbMolSupplier
rdkit.Chem.Suppliers.MolSupplier.MolSupplier
rdkit.Chem.fmcs.fmcs.AtomSmartsNoAromaticity
rdkit.Chem.fmcs.fmcs.CachingTargetsMatcher
rdkit.Chem.fmcs.fmcs.CangenNode
rdkit.Chem.fmcs.fmcs.Default
rdkit.Chem.fmcs.fmcs.FragmentedTypedMolecule
rdkit.Chem.fmcs.fmcs.MCSResult
rdkit.Chem.fmcs.fmcs.SingleBestAtoms
rdkit.Chem.fmcs.fmcs.SingleBestAtomsCompleteRingsOnly
rdkit.Chem.fmcs.fmcs.SingleBestBonds
rdkit.Chem.fmcs.fmcs.SingleBestBondsCompleteRingsOnly
rdkit.Chem.fmcs.fmcs.Timer
rdkit.Chem.fmcs.fmcs.TypedFragment
rdkit.Chem.fmcs.fmcs.TypedMolecule
rdkit.Chem.fmcs.fmcs.Uniquer
rdkit.Chem.fmcs.fmcs.VerboseCachingTargetsMatcher
rdkit.Chem.fmcs.fmcs.VerboseHeapOps
rdkit.Chem.fmcs.fmcs.starting_from
rdkit.DataStructs.BitEnsemble.BitEnsemble
rdkit.DataStructs.HierarchyVis.VisOpts
rdkit.DataStructs.LazySignature.LazySig
rdkit.DataStructs.TopNContainer.TopNContainer
rdkit.DataStructs.VectCollection.VectCollection
rdkit.Dbase.DbConnection.DbConnect
rdkit.Dbase.DbConnection.DbError
rdkit.Dbase.DbReport.CDXImageTransformer
rdkit.Dbase.DbReport.CactvsImageTransformer
rdkit.Dbase.DbReport.RDImageTransformer
rdkit.Dbase.DbReport.ReportLabImageTransformer
rdkit.Dbase.DbResultSet.DbResultBase
rdkit.Dbase.DbResultSet.DbResultSet
rdkit.Dbase.DbResultSet.RandomAccessDbResultSet
rdkit.ML.Cluster.ClusterVis.ClusterRenderer
rdkit.ML.Cluster.ClusterVis.VisOpts
rdkit.ML.Cluster.Clusters.Cluster
rdkit.ML.Composite.BayesComposite.BayesComposite
rdkit.ML.Composite.Composite.Composite
rdkit.ML.CompositeRun.CompositeRun
rdkit.ML.Data.MLData.MLDataSet
rdkit.ML.Data.MLData.MLQuantDataSet
rdkit.ML.DecTree.DecTree.DecTreeNode
rdkit.ML.DecTree.Forest.Forest
rdkit.ML.DecTree.QuantTree.QuantTreeNode
rdkit.ML.DecTree.SigTree.SigTreeNode
rdkit.ML.DecTree.Tree.TreeNode
rdkit.ML.DecTree.TreeVis.VisOpts
rdkit.ML.Descriptors.CompoundDescriptors.CompoundDescriptorCalculator
rdkit.ML.Descriptors.Descriptors.DescriptorCalculator
rdkit.ML.Descriptors.MoleculeDescriptors.MolecularDescriptorCalculator
rdkit.ML.InfoTheory.BitClusterer.BitClusterer
rdkit.ML.KNN.KNNClassificationModel.KNNClassificationModel
rdkit.ML.KNN.KNNModel.KNNModel
rdkit.ML.KNN.KNNRegressionModel.KNNRegressionModel
rdkit.ML.ModelPackage.Packager.ClassificationError
rdkit.ML.ModelPackage.Packager.DescriptorCalculationError
rdkit.ML.ModelPackage.Packager.ModelPackage
rdkit.ML.NaiveBayes.ClassificationModel.NaiveBayesClassifier
rdkit.ML.Neural.ActFuncs.ActFunc
rdkit.ML.Neural.ActFuncs.Sigmoid
rdkit.ML.Neural.ActFuncs.TanH
rdkit.ML.Neural.NetNode.NetNode
rdkit.ML.Neural.Network.Network
rdkit.ML.Neural.Trainers.BackProp
rdkit.ML.Neural.Trainers.Trainer
rdkit.ML.files.ReFile
rdkit.SimDivFilters.SimilarityPickers.GenericPicker
rdkit.SimDivFilters.SimilarityPickers.SpreadPicker
rdkit.SimDivFilters.SimilarityPickers.TopNOverallPicker
rdkit.VLib.Filter.FilterNode
rdkit.VLib.Node.VLibNode
rdkit.VLib.NodeLib.DbMolSupply.DbMolSupplyNode
rdkit.VLib.NodeLib.DbPickleSupplier.DbPickleSupplyNode
rdkit.VLib.NodeLib.SDSupply.SDSupplyNode
rdkit.VLib.NodeLib.SmartsMolFilter.SmartsFilter
rdkit.VLib.NodeLib.SmartsRemover.SmartsRemover
rdkit.VLib.NodeLib.SmilesDupeFilter.DupeFilter
rdkit.VLib.NodeLib.SmilesOutput.OutputNode
rdkit.VLib.NodeLib.SmilesSupply.SmilesSupplyNode
rdkit.VLib.Output.OutputNode
rdkit.VLib.Supply.SupplyNode
rdkit.VLib.Transform.TransformNode
All Functions
RDRandom.random
rdkit.Chem.AllChem.AssignBondOrdersFromTemplate
rdkit.Chem.AllChem.ComputeMolShape
rdkit.Chem.AllChem.ComputeMolVolume
rdkit.Chem.AllChem.ConstrainedEmbed
rdkit.Chem.AllChem.EnumerateLibraryFromReaction
rdkit.Chem.AllChem.GenerateDepictionMatching2DStructure
rdkit.Chem.AllChem.GenerateDepictionMatching3DStructure
rdkit.Chem.AllChem.GetBestRMS
rdkit.Chem.AllChem.GetConformerRMS
rdkit.Chem.AllChem.GetConformerRMSMatrix
rdkit.Chem.AllChem.TransformMol
rdkit.Chem.AtomPairs.Pairs.ExplainPairScore
rdkit.Chem.AtomPairs.Pairs.GetAtomPairFingerprintAsBitVect
rdkit.Chem.AtomPairs.Pairs.pyScorePair
rdkit.Chem.AtomPairs.Sheridan.AssignPattyTypes
rdkit.Chem.AtomPairs.Sheridan.GetBPFingerprint
rdkit.Chem.AtomPairs.Sheridan.GetBTFingerprint
rdkit.Chem.AtomPairs.Torsions.ExplainPathScore
rdkit.Chem.AtomPairs.Torsions.GetTopologicalTorsionFingerprintAsIds
rdkit.Chem.AtomPairs.Torsions.pyScorePath
rdkit.Chem.AtomPairs.Utils.BitsInCommon
rdkit.Chem.AtomPairs.Utils.CosineSimilarity
rdkit.Chem.AtomPairs.Utils.DiceSimilarity
rdkit.Chem.AtomPairs.Utils.Dot
rdkit.Chem.AtomPairs.Utils.ExplainAtomCode
rdkit.Chem.AtomPairs.Utils.NumPiElectrons
rdkit.Chem.BRICS.BRICSBuild
rdkit.Chem.BRICS.BRICSDecompose
rdkit.Chem.BRICS.BreakBRICSBonds
rdkit.Chem.BRICS.FindBRICSBonds
rdkit.Chem.BuildFragmentCatalog.BuildCatalog
rdkit.Chem.BuildFragmentCatalog.CalcGains
rdkit.Chem.BuildFragmentCatalog.CalcGainsFromFps
rdkit.Chem.BuildFragmentCatalog.OutputGainsData
rdkit.Chem.BuildFragmentCatalog.ParseArgs
rdkit.Chem.BuildFragmentCatalog.ProcessGainsData
rdkit.Chem.BuildFragmentCatalog.ScoreFromLists
rdkit.Chem.BuildFragmentCatalog.ScoreMolecules
rdkit.Chem.BuildFragmentCatalog.ShowDetails
rdkit.Chem.BuildFragmentCatalog.SupplierFromDetails
rdkit.Chem.BuildFragmentCatalog.Usage
rdkit.Chem.BuildFragmentCatalog.message
rdkit.Chem.CanonSmiles
rdkit.Chem.ChemUtils.AlignDepict.AlignDepict
rdkit.Chem.ChemUtils.BulkTester.TestMolecule
rdkit.Chem.ChemUtils.BulkTester.TestSupplier
rdkit.Chem.ChemUtils.SDFToCSV.Convert
rdkit.Chem.ChemUtils.SDFToCSV.Usage
rdkit.Chem.ChemUtils.TemplateExpand.ConstructSidechains
rdkit.Chem.ChemUtils.TemplateExpand.Explode
rdkit.Chem.ChemUtils.TemplateExpand.MoveDummyNeighborsToBeginning
rdkit.Chem.ChemUtils.TemplateExpand.Usage
rdkit.Chem.ChemicalFeatures.MCFF_GetFeaturesForMol
rdkit.Chem.Descriptors.MaxAbsPartialCharge
rdkit.Chem.Descriptors.MaxPartialCharge
rdkit.Chem.Descriptors.MinAbsPartialCharge
rdkit.Chem.Descriptors.MinPartialCharge
rdkit.Chem.Descriptors.NumRadicalElectrons
rdkit.Chem.Descriptors.NumValenceElectrons
rdkit.Chem.Draw.IPythonConsole.InstallIPythonRenderer
rdkit.Chem.Draw.IPythonConsole.ShowMols
rdkit.Chem.Draw.IPythonConsole.UninstallIPythonRenderer
rdkit.Chem.Draw.IPythonConsole.display_pil_image
rdkit.Chem.Draw.MolToFile
rdkit.Chem.Draw.MolToImage
rdkit.Chem.Draw.MolToImageFile
rdkit.Chem.Draw.MolToMPL
rdkit.Chem.Draw.MolToQPixmap
rdkit.Chem.Draw.MolsToGridImage
rdkit.Chem.Draw.MolsToImage
rdkit.Chem.Draw.ReactionToImage
rdkit.Chem.Draw.ShowMol
rdkit.Chem.Draw.SimilarityMaps.GetAPFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetAtomicWeightsForFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetAtomicWeightsForModel
rdkit.Chem.Draw.SimilarityMaps.GetMorganFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetRDKFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetSimilarityMapForFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetSimilarityMapForModel
rdkit.Chem.Draw.SimilarityMaps.GetSimilarityMapFromWeights
rdkit.Chem.Draw.SimilarityMaps.GetStandardizedWeights
rdkit.Chem.Draw.SimilarityMaps.GetTTFingerprint
rdkit.Chem.Draw.aggCanvas.convertColor
rdkit.Chem.Draw.calcAtomGaussians
rdkit.Chem.Draw.spingCanvas.convertColor
rdkit.Chem.EState.AtomTypes.BuildPatts
rdkit.Chem.EState.AtomTypes.TypeAtoms
rdkit.Chem.EState.EState.EStateIndices
rdkit.Chem.EState.EState.GetPrincipleQuantumNumber
rdkit.Chem.EState.EState.MaxAbsEStateIndex
rdkit.Chem.EState.EState.MaxEStateIndex
rdkit.Chem.EState.EState.MinAbsEStateIndex
rdkit.Chem.EState.EState.MinEStateIndex
rdkit.Chem.EState.EState_VSA.EState_VSA_
rdkit.Chem.EState.EState_VSA.VSA_EState_
rdkit.Chem.EState.Fingerprinter.FingerprintMol
rdkit.Chem.FeatFinderCLI.GetAtomFeatInfo
rdkit.Chem.FeatMaps.FeatMapUtils.CombineFeatMaps
rdkit.Chem.FeatMaps.FeatMapUtils.GetFeatFeatDistMatrix
rdkit.Chem.FeatMaps.FeatMapUtils.MergeFeatPoints
rdkit.Chem.FeatMaps.FeatMapUtils.familiesMatch
rdkit.Chem.FeatMaps.FeatMapUtils.feq
rdkit.Chem.Features.FeatDirUtilsRD.ArbAxisRotation
rdkit.Chem.Features.FeatDirUtilsRD.GetAcceptor1FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetAcceptor2FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetAcceptor3FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetAromaticFeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetDonor1FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetDonor2FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetDonor3FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.cross
rdkit.Chem.Features.FeatDirUtilsRD.findNeighbors
rdkit.Chem.Features.ShowFeats.ShowArrow
rdkit.Chem.Features.ShowFeats.ShowMolFeats
rdkit.Chem.FindMolChiralCenters
rdkit.Chem.Fingerprints.ClusterMols.ClusterFromDetails
rdkit.Chem.Fingerprints.ClusterMols.ClusterPoints
rdkit.Chem.Fingerprints.ClusterMols.GetDistanceMatrix
rdkit.Chem.Fingerprints.DbFpSupplier.warning
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintMol
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromDetails
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromMols
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromPickles
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromSmiles
rdkit.Chem.Fingerprints.FingerprintMols.FoldFingerprintToTargetDensity
rdkit.Chem.Fingerprints.FingerprintMols.GetRDKFingerprint
rdkit.Chem.Fingerprints.FingerprintMols.ParseArgs
rdkit.Chem.Fingerprints.FingerprintMols.Usage
rdkit.Chem.Fingerprints.FingerprintMols.error
rdkit.Chem.Fingerprints.FingerprintMols.message
rdkit.Chem.Fingerprints.MolSimilarity.GetFingerprints
rdkit.Chem.Fingerprints.MolSimilarity.ScreenFingerprints
rdkit.Chem.Fingerprints.MolSimilarity.ScreenFromDetails
rdkit.Chem.Fingerprints.MolSimilarity.ScreenInDb
rdkit.Chem.Fraggle.FraggleSim.GetFraggleSimilarity
rdkit.Chem.Fraggle.FraggleSim.atomContrib
rdkit.Chem.Fraggle.FraggleSim.compute_fraggle_similarity_for_subs
rdkit.Chem.Fraggle.FraggleSim.delete_bonds
rdkit.Chem.Fraggle.FraggleSim.generate_fraggle_fragmentation
rdkit.Chem.Fraggle.FraggleSim.is_ring_cut_valid
rdkit.Chem.Fraggle.FraggleSim.select_fragments
rdkit.Chem.FragmentCatalog.BuildAdjacencyList
rdkit.Chem.FragmentCatalog.GetMolsMatchingBit
rdkit.Chem.FragmentCatalog.ProcessGainsFile
rdkit.Chem.FragmentCatalog.message
rdkit.Chem.FunctionalGroups.BuildFuncGroupHierarchy
rdkit.Chem.FunctionalGroups.CreateMolFingerprint
rdkit.Chem.GraphDescriptors.BalabanJ
rdkit.Chem.GraphDescriptors.BertzCT
rdkit.Chem.GraphDescriptors.Chi0
rdkit.Chem.GraphDescriptors.Chi1
rdkit.Chem.GraphDescriptors.Ipc
rdkit.Chem.GraphDescriptors._pyChiNn_
rdkit.Chem.GraphDescriptors._pyChiNv_
rdkit.Chem.Graphs.CharacteristicPolynomial
rdkit.Chem.Lipinski.HeavyAtomCount
rdkit.Chem.MCS.FindMCS
rdkit.Chem.MolDb.FingerprintUtils.BuildAtomPairFP
rdkit.Chem.MolDb.FingerprintUtils.BuildMorganFP
rdkit.Chem.MolDb.FingerprintUtils.BuildPharm2DFP
rdkit.Chem.MolDb.FingerprintUtils.BuildRDKitFP
rdkit.Chem.MolDb.FingerprintUtils.BuildSigFactory
rdkit.Chem.MolDb.FingerprintUtils.BuildTorsionsFP
rdkit.Chem.MolDb.FingerprintUtils.DepickleFP
rdkit.Chem.MolDb.Loader_orig.ConvertRows
rdkit.Chem.MolDb.Loader_orig.LoadDb
rdkit.Chem.MolDb.Loader_orig.ProcessMol
rdkit.Chem.MolDb.Loader_sa.LoadDb
rdkit.Chem.MolDb.Loader_sa.ProcessMol
rdkit.Chem.MolDb.Loader_sa.RegisterSchema
rdkit.Chem.MolKey.MolKey.CheckCTAB
rdkit.Chem.MolKey.MolKey.ErrorBitsToText
rdkit.Chem.MolKey.MolKey.GetInchiForCTAB
rdkit.Chem.MolKey.MolKey.GetKeyForCTAB
rdkit.Chem.MolKey.MolKey.initStruchk
rdkit.Chem.MolSurf.pyLabuteASA
rdkit.Chem.MolSurf.pyPEOE_VSA_
rdkit.Chem.MolSurf.pySMR_VSA_
rdkit.Chem.MolSurf.pySlogP_VSA_
rdkit.Chem.PandasTools.AddMoleculeColumnToFrame
rdkit.Chem.PandasTools.AddMurckoToFrame
rdkit.Chem.PandasTools.AlignMol
rdkit.Chem.PandasTools.AlignToScaffold
rdkit.Chem.PandasTools.ChangeMoleculeRendering
rdkit.Chem.PandasTools.FrameToGridImage
rdkit.Chem.PandasTools.LoadSDF
rdkit.Chem.PandasTools.PrintAsBase64PNGString
rdkit.Chem.PandasTools.PrintDefaultMolRep
rdkit.Chem.PandasTools.RemoveSaltsFromFrame
rdkit.Chem.PandasTools.RenderImagesInAllDataFrames
rdkit.Chem.PandasTools.SaveSMILESFromFrame
rdkit.Chem.PandasTools.SaveXlsxFromFrame
rdkit.Chem.PandasTools.WriteSDF
rdkit.Chem.PandasTools.patchPandasHTMLrepr
rdkit.Chem.PandasTools.patchPandasHeadMethod
rdkit.Chem.Pharm2D.DefaultSigFactory
rdkit.Chem.Pharm2D.Generate.Gen2DFingerprint
rdkit.Chem.Pharm2D.Matcher.GetAtomsMatchingBit
rdkit.Chem.Pharm2D.Utils.BinsTriangleInequality
rdkit.Chem.Pharm2D.Utils.CountUpTo
rdkit.Chem.Pharm2D.Utils.GetAllCombinations
rdkit.Chem.Pharm2D.Utils.GetIndexCombinations
rdkit.Chem.Pharm2D.Utils.GetPossibleScaffolds
rdkit.Chem.Pharm2D.Utils.GetTriangles
rdkit.Chem.Pharm2D.Utils.GetUniqueCombinations
rdkit.Chem.Pharm2D.Utils.NumCombinations
rdkit.Chem.Pharm2D.Utils.OrderTriangle
rdkit.Chem.Pharm2D.Utils.ScaffoldPasses
rdkit.Chem.Pharm2D.Utils.UniquifyCombinations
rdkit.Chem.Pharm3D.EmbedLib.AddExcludedVolumes
rdkit.Chem.Pharm3D.EmbedLib.Check2DBounds
rdkit.Chem.Pharm3D.EmbedLib.CoarseScreenPharmacophore
rdkit.Chem.Pharm3D.EmbedLib.CombiEnum
rdkit.Chem.Pharm3D.EmbedLib.ComputeChiralVolume
rdkit.Chem.Pharm3D.EmbedLib.ConstrainedEnum
rdkit.Chem.Pharm3D.EmbedLib.DownsampleBoundsMatrix
rdkit.Chem.Pharm3D.EmbedLib.EmbedMol
rdkit.Chem.Pharm3D.EmbedLib.EmbedOne
rdkit.Chem.Pharm3D.EmbedLib.EmbedPharmacophore
rdkit.Chem.Pharm3D.EmbedLib.GetAllPharmacophoreMatches
rdkit.Chem.Pharm3D.EmbedLib.GetAtomHeavyNeighbors
rdkit.Chem.Pharm3D.EmbedLib.MatchFeatsToMol
rdkit.Chem.Pharm3D.EmbedLib.MatchPharmacophore
rdkit.Chem.Pharm3D.EmbedLib.MatchPharmacophoreToMol
rdkit.Chem.Pharm3D.EmbedLib.OptimizeMol
rdkit.Chem.Pharm3D.EmbedLib.ReplaceGroup
rdkit.Chem.Pharm3D.EmbedLib.UpdatePharmacophoreBounds
rdkit.Chem.Pharm3D.EmbedLib.isNaN
rdkit.Chem.QuickSmartsMatch
rdkit.Chem.Randomize.CheckCanonicalization
rdkit.Chem.Randomize.RandomizeMol
rdkit.Chem.Randomize.RandomizeMolBlock
rdkit.Chem.Recap.RecapDecompose
rdkit.Chem.ReducedGraphs.TanimotoSimilarity
rdkit.Chem.SATIS.SATISTypes
rdkit.Chem.Scaffolds.MurckoScaffold.GetScaffoldForMol
rdkit.Chem.Scaffolds.MurckoScaffold.MakeScaffoldGeneric
rdkit.Chem.Scaffolds.MurckoScaffold.MurckoScaffoldSmiles
rdkit.Chem.Scaffolds.MurckoScaffold.MurckoScaffoldSmilesFromSmiles
rdkit.Chem.SimpleEnum.Enumerator.EnumerateReaction
rdkit.Chem.SimpleEnum.Enumerator.PreprocessReaction
rdkit.Chem.Subshape.BuilderUtils.AppendSkeletonPoints
rdkit.Chem.Subshape.BuilderUtils.AssignMolFeatsToPoints
rdkit.Chem.Subshape.BuilderUtils.CalculateDirectionsAtPoint
rdkit.Chem.Subshape.BuilderUtils.ClusterTerminalPts
rdkit.Chem.Subshape.BuilderUtils.ComputeGridIndices
rdkit.Chem.Subshape.BuilderUtils.ComputeShapeGridCentroid
rdkit.Chem.Subshape.BuilderUtils.ExpandTerminalPts
rdkit.Chem.Subshape.BuilderUtils.FindFarthestGridPoint
rdkit.Chem.Subshape.BuilderUtils.FindGridPointBetweenPoints
rdkit.Chem.Subshape.BuilderUtils.FindTerminalPtsFromConformer
rdkit.Chem.Subshape.BuilderUtils.FindTerminalPtsFromShape
rdkit.Chem.Subshape.BuilderUtils.GetMoreTerminalPoints
rdkit.Chem.Subshape.SubshapeAligner.ClusterAlignments
rdkit.Chem.Subshape.SubshapeAligner.GetShapeShapeDistance
rdkit.Chem.Subshape.SubshapeAligner.TransformMol
rdkit.Chem.Subshape.SubshapeObjects.DisplaySubshape
rdkit.Chem.Subshape.SubshapeObjects.DisplaySubshapeSkeleton
rdkit.Chem.SupplierFromFilename
rdkit.Chem.Suppliers.DbMolSupplier.warning
rdkit.Chem.TemplateAlign.AlignMolToTemplate2D
rdkit.Chem.TorsionFingerprints.CalculateTFD
rdkit.Chem.TorsionFingerprints.CalculateTorsionAngles
rdkit.Chem.TorsionFingerprints.CalculateTorsionLists
rdkit.Chem.TorsionFingerprints.CalculateTorsionWeights
rdkit.Chem.TorsionFingerprints.GetTFDBetweenConformers
rdkit.Chem.TorsionFingerprints.GetTFDBetweenMolecules
rdkit.Chem.TorsionFingerprints.GetTFDMatrix
rdkit.Chem.fmcs.fmcs.MATCH
rdkit.Chem.fmcs.fmcs.all_subgraph_extensions
rdkit.Chem.fmcs.fmcs.assign_isotopes_from_class_tag
rdkit.Chem.fmcs.fmcs.atom_typer_any
rdkit.Chem.fmcs.fmcs.atom_typer_elements
rdkit.Chem.fmcs.fmcs.atom_typer_isotopes
rdkit.Chem.fmcs.fmcs.bond_typer_any
rdkit.Chem.fmcs.fmcs.bond_typer_bondtypes
rdkit.Chem.fmcs.fmcs.canon
rdkit.Chem.fmcs.fmcs.check_completeRingsOnly
rdkit.Chem.fmcs.fmcs.compute_mcs
rdkit.Chem.fmcs.fmcs.convert_input_to_typed_molecules
rdkit.Chem.fmcs.fmcs.enumerate_subgraphs
rdkit.Chem.fmcs.fmcs.find_duplicates
rdkit.Chem.fmcs.fmcs.find_extension_size
rdkit.Chem.fmcs.fmcs.find_extensions
rdkit.Chem.fmcs.fmcs.find_upper_fragment_size_limits
rdkit.Chem.fmcs.fmcs.fmcs
rdkit.Chem.fmcs.fmcs.fragmented_mol_to_enumeration_mols
rdkit.Chem.fmcs.fmcs.gen_primes
rdkit.Chem.fmcs.fmcs.generate_smarts
rdkit.Chem.fmcs.fmcs.get_canonical_bondtype_counts
rdkit.Chem.fmcs.fmcs.get_canonical_bondtypes
rdkit.Chem.fmcs.fmcs.get_closure_label
rdkit.Chem.fmcs.fmcs.get_counts
rdkit.Chem.fmcs.fmcs.get_initial_cangen_nodes
rdkit.Chem.fmcs.fmcs.get_isotopes
rdkit.Chem.fmcs.fmcs.get_selected_atom_classes
rdkit.Chem.fmcs.fmcs.get_specified_types
rdkit.Chem.fmcs.fmcs.get_typed_fragment
rdkit.Chem.fmcs.fmcs.get_typed_molecule
rdkit.Chem.fmcs.fmcs.intersect_counts
rdkit.Chem.fmcs.fmcs.main
rdkit.Chem.fmcs.fmcs.make_arbitrary_smarts
rdkit.Chem.fmcs.fmcs.make_canonical_smarts
rdkit.Chem.fmcs.fmcs.make_complete_sdf
rdkit.Chem.fmcs.fmcs.make_fragment_sdf
rdkit.Chem.fmcs.fmcs.make_fragment_smiles
rdkit.Chem.fmcs.fmcs.make_structure_format
rdkit.Chem.fmcs.fmcs.nonempty_powerset
rdkit.Chem.fmcs.fmcs.parse_num_atoms
rdkit.Chem.fmcs.fmcs.parse_select
rdkit.Chem.fmcs.fmcs.parse_threshold
rdkit.Chem.fmcs.fmcs.parse_timeout
rdkit.Chem.fmcs.fmcs.powerset
rdkit.Chem.fmcs.fmcs.prune_maximize_atoms
rdkit.Chem.fmcs.fmcs.prune_maximize_bonds
rdkit.Chem.fmcs.fmcs.remove_unknown_bondtypes
rdkit.Chem.fmcs.fmcs.rerank
rdkit.Chem.fmcs.fmcs.restore_isotopes
rdkit.Chem.fmcs.fmcs.save_atom_classes
rdkit.Chem.fmcs.fmcs.save_isotopes
rdkit.Chem.fmcs.fmcs.set_isotopes
rdkit.Chem.fmcs.fmcs.subgraph_to_fragment
rdkit.DataStructs.BitUtils.ConstructEnsembleBV
rdkit.DataStructs.FingerprintSimilarity
rdkit.DataStructs.FoldToTargetDensity
rdkit.DataStructs.HierarchyVis.DrawHierarchy
rdkit.DataStructs.HierarchyVis.GetMinCanvasSize
rdkit.Dbase.DbInfo.GetColumnInfoFromCursor
rdkit.Dbase.DbInfo.GetColumnNames
rdkit.Dbase.DbInfo.GetColumnNamesAndTypes
rdkit.Dbase.DbInfo.GetDbNames
rdkit.Dbase.DbInfo.GetTableNames
rdkit.Dbase.DbReport.GetReportlabTable
rdkit.Dbase.DbReport.QuickReport
rdkit.Dbase.DbUtils.DatabaseToDatabase
rdkit.Dbase.DbUtils.DatabaseToText
rdkit.Dbase.DbUtils.GetColumns
rdkit.Dbase.DbUtils.GetData
rdkit.Dbase.DbUtils.GetTypeStrings
rdkit.Dbase.DbUtils.TextFileToDatabase
rdkit.Dbase.DbUtils.TypeFinder
rdkit.Dbase.StorageUtils.GetNextId
rdkit.Dbase.StorageUtils.GetNextRDId
rdkit.Dbase.StorageUtils.IndexToRDId
rdkit.Dbase.StorageUtils.RDIdToInt
rdkit.Dbase.StorageUtils.RegisterItem
rdkit.Dbase.StorageUtils.RegisterItems
rdkit.Dbase.StorageUtils.ValidateRDId
rdkit.ML.AnalyzeComposite.ErrorStats
rdkit.ML.AnalyzeComposite.ProcessIt
rdkit.ML.AnalyzeComposite.ShowStats
rdkit.ML.AnalyzeComposite.Usage
rdkit.ML.BuildComposite.GetCommandLine
rdkit.ML.BuildComposite.ParseArgs
rdkit.ML.BuildComposite.RunIt
rdkit.ML.BuildComposite.RunOnData
rdkit.ML.BuildComposite.SetDefaults
rdkit.ML.BuildComposite.ShowVersion
rdkit.ML.BuildComposite.Usage
rdkit.ML.BuildComposite.message
rdkit.ML.BuildComposite.testall
rdkit.ML.Cluster.Butina.ClusterData
rdkit.ML.Cluster.Butina.EuclideanDist
rdkit.ML.Cluster.ClusterUtils.FindClusterCentroidFromDists
rdkit.ML.Cluster.ClusterUtils.GetNodeList
rdkit.ML.Cluster.ClusterUtils.GetNodesDownToCentroids
rdkit.ML.Cluster.ClusterUtils.SplitIntoNClusters
rdkit.ML.Cluster.ClusterVis.ClusterToImg
rdkit.ML.Cluster.ClusterVis.ClusterToPDF
rdkit.ML.Cluster.ClusterVis.ClusterToSVG
rdkit.ML.Cluster.ClusterVis.DrawClusterTree
rdkit.ML.Cluster.Murtagh.ClusterData
rdkit.ML.Cluster.Resemblance.CalcMetricMatrix
rdkit.ML.Cluster.Resemblance.EuclideanDistance
rdkit.ML.Cluster.Resemblance.FindMinValInList
rdkit.ML.Cluster.Resemblance.ShowMetricMat
rdkit.ML.Cluster.Standardize.StdDev
rdkit.ML.Composite.AdjustComposite.BalanceComposite
rdkit.ML.Composite.BayesComposite.BayesCompositeToComposite
rdkit.ML.Composite.BayesComposite.CompositeToBayesComposite
rdkit.ML.CompositeRun.SetDefaults
rdkit.ML.Data.DataUtils.BuildDataSet
rdkit.ML.Data.DataUtils.BuildQuantDataSet
rdkit.ML.Data.DataUtils.CalcNPossibleUsingMap
rdkit.ML.Data.DataUtils.CountResults
rdkit.ML.Data.DataUtils.DBToData
rdkit.ML.Data.DataUtils.FilterData
rdkit.ML.Data.DataUtils.InitRandomNumbers
rdkit.ML.Data.DataUtils.RandomizeActivities
rdkit.ML.Data.DataUtils.ReadGeneralExamples
rdkit.ML.Data.DataUtils.ReadQuantExamples
rdkit.ML.Data.DataUtils.ReadVars
rdkit.ML.Data.DataUtils.TakeEnsemble
rdkit.ML.Data.DataUtils.TextFileToData
rdkit.ML.Data.DataUtils.TextToData
rdkit.ML.Data.DataUtils.WriteData
rdkit.ML.Data.DataUtils.WritePickledData
rdkit.ML.Data.DataUtils.permutation
rdkit.ML.Data.FindQuantBounds.Usage
rdkit.ML.Data.FindQuantBounds.runIt
rdkit.ML.Data.Quantize.FindVarMultQuantBounds
rdkit.ML.Data.Quantize.FindVarQuantBound
rdkit.ML.Data.Quantize.feq
rdkit.ML.Data.SplitData.SplitDataSet
rdkit.ML.Data.SplitData.SplitDbData
rdkit.ML.Data.SplitData.SplitIndices
rdkit.ML.Data.Stats.FormCorrelationMatrix
rdkit.ML.Data.Stats.FormCovarianceMatrix
rdkit.ML.Data.Stats.GetConfidenceInterval
rdkit.ML.Data.Stats.MeanAndDev
rdkit.ML.Data.Stats.PrincipalComponents
rdkit.ML.Data.Stats.R2
rdkit.ML.Data.Stats.StandardizeMatrix
rdkit.ML.Data.Stats.TransformPoints
rdkit.ML.Data.Transforms.GetAvailTransforms
rdkit.ML.DecTree.BuildQuantTree.BuildQuantTree
rdkit.ML.DecTree.BuildQuantTree.FindBest
rdkit.ML.DecTree.BuildQuantTree.QuantTreeBoot
rdkit.ML.DecTree.BuildQuantTree.TestQuantTree
rdkit.ML.DecTree.BuildQuantTree.TestQuantTree2
rdkit.ML.DecTree.BuildQuantTree.TestTree
rdkit.ML.DecTree.BuildSigTree.BuildSigTree
rdkit.ML.DecTree.BuildSigTree.SigTreeBuilder
rdkit.ML.DecTree.CrossValidate.ChooseOptimalRoot
rdkit.ML.DecTree.CrossValidate.CrossValidate
rdkit.ML.DecTree.CrossValidate.CrossValidationDriver
rdkit.ML.DecTree.CrossValidate.TestRun
rdkit.ML.DecTree.ID3.CalcTotalEntropy
rdkit.ML.DecTree.ID3.GenVarTable
rdkit.ML.DecTree.ID3.ID3
rdkit.ML.DecTree.ID3.ID3Boot
rdkit.ML.DecTree.PruneTree.MaxCount
rdkit.ML.DecTree.PruneTree.PruneTree
rdkit.ML.DecTree.TreeUtils.CollectDescriptorNames
rdkit.ML.DecTree.TreeUtils.CollectLabelLevels
rdkit.ML.DecTree.TreeVis.CalcTreeNodeSizes
rdkit.ML.DecTree.TreeVis.CalcTreeWidth
rdkit.ML.DecTree.TreeVis.DrawTree
rdkit.ML.DecTree.TreeVis.DrawTreeNode
rdkit.ML.DecTree.TreeVis.ResetTree
rdkit.ML.DecTree.TreeVis.SetNodeScales
rdkit.ML.Descriptors.CompoundDescriptors.GetAllDescriptorNames
rdkit.ML.Descriptors.Parser.CalcMultipleCompoundsDescriptor
rdkit.ML.Descriptors.Parser.CalcSingleCompoundDescriptor
rdkit.ML.Descriptors.Parser.DEV
rdkit.ML.Descriptors.Parser.HAS
rdkit.ML.Descriptors.Parser.MAX
rdkit.ML.Descriptors.Parser.MEAN
rdkit.ML.Descriptors.Parser.MIN
rdkit.ML.Descriptors.Parser.SUM
rdkit.ML.EnrichPlot.AccumulateCounts
rdkit.ML.EnrichPlot.MakePlot
rdkit.ML.EnrichPlot.ScreenModel
rdkit.ML.EnrichPlot.Usage
rdkit.ML.EnrichPlot.error
rdkit.ML.EnrichPlot.message
rdkit.ML.GrowComposite.BalanceComposite
rdkit.ML.GrowComposite.GetComposites
rdkit.ML.GrowComposite.GrowIt
rdkit.ML.GrowComposite.ParseArgs
rdkit.ML.GrowComposite.SetDefaults
rdkit.ML.GrowComposite.ShowVersion
rdkit.ML.GrowComposite.Usage
rdkit.ML.GrowComposite.message
rdkit.ML.InfoTheory.BitRank.AnalyzeSparseVects
rdkit.ML.InfoTheory.BitRank.CalcInfoGains
rdkit.ML.InfoTheory.BitRank.FormCounts
rdkit.ML.InfoTheory.BitRank.RankBits
rdkit.ML.InfoTheory.BitRank.SparseRankBits
rdkit.ML.InfoTheory.entropy.PyInfoEntropy
rdkit.ML.InfoTheory.entropy.PyInfoGain
rdkit.ML.KNN.CrossValidate.CrossValidate
rdkit.ML.KNN.CrossValidate.CrossValidationDriver
rdkit.ML.KNN.CrossValidate.makeClassificationModel
rdkit.ML.KNN.CrossValidate.makeRegressionModel
rdkit.ML.KNN.DistFunctions.EuclideanDist
rdkit.ML.KNN.DistFunctions.TanimotoDist
rdkit.ML.MLUtils.VoteImg.BuildVoteImage
rdkit.ML.MLUtils.VoteImg.CollectVotes
rdkit.ML.MLUtils.VoteImg.Usage
rdkit.ML.MLUtils.VoteImg.VoteAndBuildImage
rdkit.ML.ModelPackage.PackageUtils.PackageToXml
rdkit.ML.NaiveBayes.CrossValidate.CrossValidate
rdkit.ML.NaiveBayes.CrossValidate.CrossValidationDriver
rdkit.ML.NaiveBayes.CrossValidate.makeNBClassificationModel
rdkit.ML.Neural.CrossValidate.CrossValidate
rdkit.ML.Neural.CrossValidate.CrossValidationDriver
rdkit.ML.SLT.Risk.BurgesRiskBound
rdkit.ML.SLT.Risk.CherkasskyRiskBound
rdkit.ML.SLT.Risk.CristianiRiskBound
rdkit.ML.SLT.Risk.log2
rdkit.ML.Scoring.Scoring.CalcAUC
rdkit.ML.Scoring.Scoring.CalcBEDROC
rdkit.ML.Scoring.Scoring.CalcEnrichment
rdkit.ML.Scoring.Scoring.CalcRIE
rdkit.ML.Scoring.Scoring.CalcROC
rdkit.ML.ScreenComposite.CalcEnrichment
rdkit.ML.ScreenComposite.CollectResults
rdkit.ML.ScreenComposite.DetailedScreen
rdkit.ML.ScreenComposite.GetScreenImage
rdkit.ML.ScreenComposite.Go
rdkit.ML.ScreenComposite.MakePredPlot
rdkit.ML.ScreenComposite.ParseArgs
rdkit.ML.ScreenComposite.PrepareDataFromDetails
rdkit.ML.ScreenComposite.ScreenFromDetails
rdkit.ML.ScreenComposite.ScreenIt
rdkit.ML.ScreenComposite.ScreenToHtml
rdkit.ML.ScreenComposite.SetDefaults
rdkit.ML.ScreenComposite.ShowVersion
rdkit.ML.ScreenComposite.ShowVoteResults
rdkit.ML.ScreenComposite.Usage
rdkit.ML.ScreenComposite.error
rdkit.ML.ScreenComposite.message
rdkit.ML.files.ReadDataFile
rdkit.VLib.NodeLib.DbMolSupply.GetNode
rdkit.VLib.NodeLib.DbPickleSupplier.GetNode
All Variables
RDRandom.__package__
rdkit.Chem.AllChem.logger
rdkit.Chem.AtomPairs.Pairs.GetAtomPairFingerprintAsIntVect
rdkit.Chem.AtomPairs.Pairs.fpLen
rdkit.Chem.AtomPairs.Pairs.numFpBits
rdkit.Chem.AtomPairs.Pairs.numPathBits
rdkit.Chem.AtomPairs.Sheridan.fpLen
rdkit.Chem.AtomPairs.Sheridan.numFpBits
rdkit.Chem.AtomPairs.Sheridan.numPathBits
rdkit.Chem.AtomPairs.Sheridan.typMap
rdkit.Chem.AtomPairs.Torsions.GetTopologicalTorsionFingerprintAsIntVect
rdkit.Chem.AtomPairs.Utils.GetAtomCode
rdkit.Chem.BRICS.bondMatchers
rdkit.Chem.BRICS.dummyPattern
rdkit.Chem.BRICS.environMatchers
rdkit.Chem.BRICS.environs
rdkit.Chem.BRICS.reactionDefs
rdkit.Chem.BRICS.reactions
rdkit.Chem.BRICS.reverseReactions
rdkit.Chem.BRICS.smartsGps
rdkit.Chem.BuildFragmentCatalog.idx1
rdkit.Chem.BuildFragmentCatalog.idx2
rdkit.Chem.ChemUtils.TemplateExpand.logger
rdkit.Chem.ChemUtils.TemplateExpand.nDumped
rdkit.Chem.Crippen.MolLogP
rdkit.Chem.Crippen.MolMR
rdkit.Chem.Crippen.defaultPatternFileName
rdkit.Chem.Descriptors.ExactMolWt
rdkit.Chem.Descriptors.HeavyAtomMolWt
rdkit.Chem.Descriptors.MolWt
rdkit.Chem.Draw.IPythonConsole.camera_type_3d
rdkit.Chem.Draw.IPythonConsole.drawing_type_3d
rdkit.Chem.Draw.IPythonConsole.highlightSubstructs
rdkit.Chem.Draw.IPythonConsole.ipython_3d
rdkit.Chem.Draw.IPythonConsole.ipython_useSVG
rdkit.Chem.Draw.IPythonConsole.kekulizeStructures
rdkit.Chem.Draw.IPythonConsole.molSize
rdkit.Chem.Draw.IPythonConsole.molSize_3d
rdkit.Chem.Draw.IPythonConsole.shader_3d
rdkit.Chem.Draw.MolDrawing.periodicTable
rdkit.Chem.Draw.SimilarityMaps.apDict
rdkit.Chem.Draw.SimilarityMaps.ttDict
rdkit.Chem.Draw.aggCanvas.faceMap
rdkit.Chem.Draw.cairoCanvas.pango
rdkit.Chem.Draw.cairoCanvas.pangocairo
rdkit.Chem.Draw.cairoCanvas.scriptPattern
rdkit.Chem.Draw.spingCanvas.faceMap
rdkit.Chem.Draw.tkLabel
rdkit.Chem.Draw.tkPI
rdkit.Chem.Draw.tkRoot
rdkit.Chem.EState.AtomTypes.esPatterns
rdkit.Chem.EState.EState_VSA.estateBins
rdkit.Chem.EState.EState_VSA.vsaBins
rdkit.Chem.FeatFinderCLI.logger
rdkit.Chem.FeatFinderCLI.splitExpr
rdkit.Chem.Features.ShowFeats.ALPHA
rdkit.Chem.Features.ShowFeats.BEGIN
rdkit.Chem.Features.ShowFeats.COLOR
rdkit.Chem.Features.ShowFeats.CYLINDER
rdkit.Chem.Features.ShowFeats.END
rdkit.Chem.Features.ShowFeats.NORMAL
rdkit.Chem.Features.ShowFeats.SPHERE
rdkit.Chem.Features.ShowFeats.TRIANGLE_FAN
rdkit.Chem.Features.ShowFeats.VERTEX
rdkit.Chem.Features.ShowFeats.logger
rdkit.Chem.Features.ShowFeats.parser
rdkit.Chem.Fingerprints.ClusterMols.idx1
rdkit.Chem.Fingerprints.ClusterMols.idx2
rdkit.Chem.Fingerprints.FingerprintMols.idx1
rdkit.Chem.Fingerprints.FingerprintMols.idx2
rdkit.Chem.Fingerprints.MolSimilarity.idx1
rdkit.Chem.Fingerprints.MolSimilarity.idx2
rdkit.Chem.Fraggle.FraggleSim.acyc_smarts
rdkit.Chem.Fraggle.FraggleSim.cSma1
rdkit.Chem.Fraggle.FraggleSim.cSma2
rdkit.Chem.Fraggle.FraggleSim.cyc_smarts
rdkit.Chem.Fraggle.FraggleSim.modified_query_fps
rdkit.Chem.Fraggle.FraggleSim.rdkitFpParams
rdkit.Chem.Fragments.defaultPatternFileName
rdkit.Chem.Fragments.fn
rdkit.Chem.Fragments.fns
rdkit.Chem.FunctionalGroups.groupDefns
rdkit.Chem.FunctionalGroups.hierarchy
rdkit.Chem.FunctionalGroups.lastData
rdkit.Chem.FunctionalGroups.lastFilename
rdkit.Chem.GraphDescriptors.Chi0n
rdkit.Chem.GraphDescriptors.Chi0v
rdkit.Chem.GraphDescriptors.Chi1n
rdkit.Chem.GraphDescriptors.Chi1v
rdkit.Chem.GraphDescriptors.Chi2n
rdkit.Chem.GraphDescriptors.Chi2v
rdkit.Chem.GraphDescriptors.Chi3n
rdkit.Chem.GraphDescriptors.Chi3v
rdkit.Chem.GraphDescriptors.Chi4n
rdkit.Chem.GraphDescriptors.Chi4v
rdkit.Chem.GraphDescriptors.ChiNn_
rdkit.Chem.GraphDescriptors.ChiNv_
rdkit.Chem.GraphDescriptors.HallKierAlpha
rdkit.Chem.GraphDescriptors.Kappa1
rdkit.Chem.GraphDescriptors.Kappa2
rdkit.Chem.GraphDescriptors.Kappa3
rdkit.Chem.GraphDescriptors.periodicTable
rdkit.Chem.Lipinski.HAcceptorSmarts
rdkit.Chem.Lipinski.HDonorSmarts
rdkit.Chem.Lipinski.HeteroatomSmarts
rdkit.Chem.Lipinski.NHOHCount
rdkit.Chem.Lipinski.NHOHSmarts
rdkit.Chem.Lipinski.NOCount
rdkit.Chem.Lipinski.NOCountSmarts
rdkit.Chem.Lipinski.NumHAcceptors
rdkit.Chem.Lipinski.NumHDonors
rdkit.Chem.Lipinski.NumHeteroatoms
rdkit.Chem.Lipinski.NumRotatableBonds
rdkit.Chem.Lipinski.RingCount
rdkit.Chem.Lipinski.RotatableBondSmarts
rdkit.Chem.MACCSkeys.FingerprintMol
rdkit.Chem.MACCSkeys.GenMACCSKeys
rdkit.Chem.MACCSkeys.maccsKeys
rdkit.Chem.MACCSkeys.smartsPatts
rdkit.Chem.MolDb.FingerprintUtils.similarityMethods
rdkit.Chem.MolDb.FingerprintUtils.supportedSimilarityMethods
rdkit.Chem.MolDb.Loader_orig.logger
rdkit.Chem.MolDb.Loader_sa.decBase
rdkit.Chem.MolDb.Loader_sa.logger
rdkit.Chem.MolKey.InchiInfo.ACETATE
rdkit.Chem.MolKey.InchiInfo.ACETIC_ACID
rdkit.Chem.MolKey.InchiInfo.DEUTERATED_UREA
rdkit.Chem.MolKey.InchiInfo.GUANINE
rdkit.Chem.MolKey.InchiInfo.TRITIATED_UREA
rdkit.Chem.MolKey.InchiInfo.UPD_APP
rdkit.Chem.MolKey.InchiInfo.UREA1
rdkit.Chem.MolKey.InchiInfo.UREA2
rdkit.Chem.MolKey.InchiInfo.all_stereo_re
rdkit.Chem.MolKey.InchiInfo.console
rdkit.Chem.MolKey.InchiInfo.defined_stereo_re
rdkit.Chem.MolKey.InchiInfo.fixed_h_re
rdkit.Chem.MolKey.InchiInfo.h_layer_re
rdkit.Chem.MolKey.InchiInfo.isotope_re
rdkit.Chem.MolKey.InchiInfo.mobile1
rdkit.Chem.MolKey.InchiInfo.mobile2
rdkit.Chem.MolKey.InchiInfo.mobile_h_atoms_re
rdkit.Chem.MolKey.InchiInfo.mobile_h_group_re
rdkit.Chem.MolKey.InchiInfo.reconnected_re
rdkit.Chem.MolKey.InchiInfo.sp3_unk
rdkit.Chem.MolKey.InchiInfo.stereo_all_re
rdkit.Chem.MolKey.InchiInfo.stereo_re
rdkit.Chem.MolKey.InchiInfo.sugar1
rdkit.Chem.MolKey.InchiInfo.sugar2
rdkit.Chem.MolKey.InchiInfo.undef_stereo_re
rdkit.Chem.MolKey.InchiInfo.version_re
rdkit.Chem.MolKey.MolKey.BAD_SET
rdkit.Chem.MolKey.MolKey.CHIRAL_POS
rdkit.Chem.MolKey.MolKey.ERROR_DICT
rdkit.Chem.MolKey.MolKey.GET_STEREO_RE
rdkit.Chem.MolKey.MolKey.INCHI_COMPUTATION_ERROR
rdkit.Chem.MolKey.MolKey.INCHI_READWRITE_ERROR
rdkit.Chem.MolKey.MolKey.InchiResult
rdkit.Chem.MolKey.MolKey.MOL_KEY_VERSION
rdkit.Chem.MolKey.MolKey.MolKeyResult
rdkit.Chem.MolKey.MolKey.NULL_MOL
rdkit.Chem.MolKey.MolKey.NULL_SMILES_RE
rdkit.Chem.MolKey.MolKey.PATTERN_NULL_MOL
rdkit.Chem.MolKey.MolKey.RDKIT_CONVERSION_ERROR
rdkit.Chem.MolKey.MolKey.T_NULL_MOL
rdkit.Chem.MolKey.MolKey.stereo_code_dict
rdkit.Chem.MolSurf.LabuteASA
rdkit.Chem.MolSurf.PEOE_VSA_
rdkit.Chem.MolSurf.SMR_VSA_
rdkit.Chem.MolSurf.SlogP_VSA_
rdkit.Chem.MolSurf.TPSA
rdkit.Chem.MolSurf.bondScaleFacts
rdkit.Chem.MolSurf.chgBins
rdkit.Chem.MolSurf.logpBins
rdkit.Chem.MolSurf.mrBins
rdkit.Chem.MolSurf.radCol
rdkit.Chem.PandasTools.defPandasRendering
rdkit.Chem.PandasTools.highlightSubstructures
rdkit.Chem.PandasTools.molRepresentation
rdkit.Chem.PandasTools.molSize
rdkit.Chem.PandasTools.pd
rdkit.Chem.PandasTools.v
rdkit.Chem.PeriodicTable.hallKierAlphas
rdkit.Chem.PeriodicTable.metalNames
rdkit.Chem.PeriodicTable.metalNumList
rdkit.Chem.PeriodicTable.metalRanges
rdkit.Chem.PeriodicTable.nameTable
rdkit.Chem.PeriodicTable.numTable
rdkit.Chem.PeriodicTable.periodicData
rdkit.Chem.Pharm2D.Generate.logger
rdkit.Chem.Pharm2D.Gobbi_Pharm2D.defaultBins
rdkit.Chem.Pharm2D.Gobbi_Pharm2D.fdef
rdkit.Chem.Pharm2D.Utils.nDistPointDict
rdkit.Chem.Pharm2D.Utils.nPointDistDict
rdkit.Chem.Pharm3D.EmbedLib.defaultFeatLength
rdkit.Chem.Pharm3D.EmbedLib.logger
rdkit.Chem.Pharm3D.Pharmacophore.logger
rdkit.Chem.Recap.reactionDefs
rdkit.Chem.Recap.reactions
rdkit.Chem.SATIS.aldehydePatt
rdkit.Chem.SATIS.amidePatt
rdkit.Chem.SATIS.carboxylPatt
rdkit.Chem.SATIS.carboxylatePatt
rdkit.Chem.SATIS.esterPatt
rdkit.Chem.SATIS.ketonePatt
rdkit.Chem.SATIS.specialCases
rdkit.Chem.Scaffolds.MurckoScaffold.aromaticNTransform
rdkit.Chem.Scaffolds.MurckoScaffold.murckoPatts
rdkit.Chem.Scaffolds.MurckoScaffold.murckoQ
rdkit.Chem.Scaffolds.MurckoScaffold.murckoTransforms
rdkit.Chem.Subshape.SubshapeAligner.logger
rdkit.Chem.fmcs.fmcs.Atom
rdkit.Chem.fmcs.fmcs.Bond
rdkit.Chem.fmcs.fmcs.DirectedEdge
rdkit.Chem.fmcs.fmcs.EnumerationMolecule
rdkit.Chem.fmcs.fmcs.OutgoingEdge
rdkit.Chem.fmcs.fmcs.Subgraph
rdkit.Chem.fmcs.fmcs.atom_typers
rdkit.Chem.fmcs.fmcs.bond_typers
rdkit.Chem.fmcs.fmcs.compare_shortcuts
rdkit.Chem.fmcs.fmcs.default_atom_typer
rdkit.Chem.fmcs.fmcs.default_bond_typer
rdkit.Chem.fmcs.fmcs.range_pat
rdkit.Chem.fmcs.fmcs.structure_format_functions
rdkit.Chem.fmcs.fmcs.tiebreaker
rdkit.Chem.fmcs.fmcs.value_pat
rdkit.Chem.inchi.INCHI_AVAILABLE
rdkit.DataStructs.HierarchyVis.visOpts
rdkit.DataStructs.__doc__
rdkit.DataStructs.similarityFunctions
rdkit.Dbase.DbInfo.sqlBinTypes
rdkit.Dbase.DbInfo.sqlFloatTypes
rdkit.Dbase.DbInfo.sqlIntTypes
rdkit.Dbase.DbInfo.sqlTextTypes
rdkit.Dbase.DbModule.RDTestDatabase
rdkit.Dbase.DbModule.binaryHolder
rdkit.Dbase.DbModule.binaryTypeName
rdkit.Dbase.DbModule.connect
rdkit.Dbase.DbModule.dbFileWildcard
rdkit.Dbase.DbModule.fileWildcard
rdkit.Dbase.DbModule.getDbSql
rdkit.Dbase.DbModule.getTablesAndViewsSql
rdkit.Dbase.DbModule.getTablesSql
rdkit.Dbase.DbModule.placeHolder
rdkit.Dbase.DbModule.sqlBinTypes
rdkit.Dbase.DbModule.sqlFloatTypes
rdkit.Dbase.DbModule.sqlIntTypes
rdkit.Dbase.DbModule.sqlTextTypes
rdkit.Dbase.DbReport.hasCDX
rdkit.Dbase.StorageUtils.__test__
rdkit.ML.Cluster.Butina.logger
rdkit.ML.Cluster.Clusters.CMPTOL
rdkit.ML.Cluster.Murtagh.CENTROID
rdkit.ML.Cluster.Murtagh.CLINK
rdkit.ML.Cluster.Murtagh.GOWER
rdkit.ML.Cluster.Murtagh.MCQUITTY
rdkit.ML.Cluster.Murtagh.SLINK
rdkit.ML.Cluster.Murtagh.UPGMA
rdkit.ML.Cluster.Murtagh.WARDS
rdkit.ML.Cluster.Murtagh.methods
rdkit.ML.Cluster.Resemblance.methods
rdkit.ML.Cluster.Standardize.methods
rdkit.ML.Data.MLData.numericTypes
rdkit.ML.Data.Quantize.hascQuantize
rdkit.ML.Data.SplitData.SeqTypes
rdkit.ML.Data.Stats.tConfs
rdkit.ML.Data.Stats.tTable
rdkit.ML.DecTree.BuildSigTree.CMIM
rdkit.ML.DecTree.TreeUtils.__test__
rdkit.ML.DecTree.TreeVis.visOpts
rdkit.ML.Descriptors.CompoundDescriptors.countOptions
rdkit.ML.Descriptors.MoleculeDescriptors.logger
rdkit.ML.Descriptors.Parser.knownMethods
rdkit.ML.InfoTheory.entropy.hascEntropy
rdkit.ML.NaiveBayes.CrossValidate.CMIM
rdkit.ML.ScreenComposite.hasPil
rdkit.SimDivFilters.rdSimDivPickers
rdkit.VLib.NodeLib.SmartsRemover.__test__
rdkit.VLib.NodeLib.SmartsRemover.biggerTest
rdkit.VLib.NodeLib.demo.atsFilter
rdkit.VLib.NodeLib.demo.dupeFilter
rdkit.VLib.NodeLib.demo.io
rdkit.VLib.NodeLib.demo.metals
rdkit.VLib.NodeLib.demo.mols
rdkit.VLib.NodeLib.demo.output
rdkit.VLib.NodeLib.demo.remover
rdkit.VLib.NodeLib.demo.salts
rdkit.VLib.NodeLib.demo.smaFilter
rdkit.VLib.NodeLib.demo.smis
rdkit.VLib.NodeLib.demo.supplier
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