Everything


All Classes

buffer
rdkit.Chem.BuildFragmentCatalog.RunDetails
rdkit.Chem.ChemUtils.SDFToCSV.TestCase
rdkit.Chem.DSViewer.Displayable
rdkit.Chem.DSViewer.MolViewer
rdkit.Chem.Draw.MolDrawing.DrawingOptions
rdkit.Chem.Draw.MolDrawing.Font
rdkit.Chem.Draw.MolDrawing.MolDrawing
rdkit.Chem.Draw.aggCanvas.Canvas
rdkit.Chem.Draw.cairoCanvas.Canvas
rdkit.Chem.Draw.canvasbase.CanvasBase
rdkit.Chem.Draw.mplCanvas.Canvas
rdkit.Chem.Draw.qtCanvas.Canvas
rdkit.Chem.Draw.spingCanvas.Canvas
rdkit.Chem.FastSDMolSupplier.FastSDMolSupplier
rdkit.Chem.FeatMaps.FeatMapParser.FeatMapParseError
rdkit.Chem.FeatMaps.FeatMapParser.FeatMapParser
rdkit.Chem.FeatMaps.FeatMapPoint.FeatMapPoint
rdkit.Chem.FeatMaps.FeatMapUtils.DirMergeMode
rdkit.Chem.FeatMaps.FeatMapUtils.MergeMethod
rdkit.Chem.FeatMaps.FeatMapUtils.MergeMetric
rdkit.Chem.FeatMaps.FeatMaps.FeatDirScoreMode
rdkit.Chem.FeatMaps.FeatMaps.FeatMap
rdkit.Chem.FeatMaps.FeatMaps.FeatMapParams
rdkit.Chem.FeatMaps.FeatMaps.FeatMapParams.FeatProfile
rdkit.Chem.FeatMaps.FeatMaps.FeatMapScoreMode
rdkit.Chem.FilterCatalog.FilterMatcher
rdkit.Chem.Fingerprints.DbFpSupplier.DbFpSupplier
rdkit.Chem.Fingerprints.DbFpSupplier.ForwardDbFpSupplier
rdkit.Chem.Fingerprints.DbFpSupplier.RandomAccessDbFpSupplier
rdkit.Chem.Fingerprints.FingerprintMols.FingerprinterDetails
rdkit.Chem.Fingerprints.SimilarityScreener.SimilarityScreener
rdkit.Chem.Fingerprints.SimilarityScreener.ThresholdScreener
rdkit.Chem.Fingerprints.SimilarityScreener.TopNScreener
rdkit.Chem.FragmentCatalog.BitGainsInfo
rdkit.Chem.FragmentMatcher.FragmentMatcher
rdkit.Chem.FunctionalGroups.FGHierarchyNode
rdkit.Chem.FunctionalGroups.FuncGroupFileParseError
rdkit.Chem.MCS.MCSResult
rdkit.Chem.MolDb.FingerprintUtils.LayeredOptions
rdkit.Chem.MolDb.Loader_sa.Compound
rdkit.Chem.MolKey.InchiInfo.InchiInfo
rdkit.Chem.MolKey.InchiInfo.TestInchiInfo
rdkit.Chem.MolKey.MolKey.BadMoleculeException
rdkit.Chem.MolKey.MolKey.MolIdentifierException
rdkit.Chem.Pharm2D.LazyGenerator.Generator
rdkit.Chem.Pharm2D.Matcher.MatchError
rdkit.Chem.Pharm2D.SigFactory.SigFactory
rdkit.Chem.Pharm3D.ExcludedVolume.ExcludedVolume
rdkit.Chem.Pharm3D.Pharmacophore.ExplicitPharmacophore
rdkit.Chem.Pharm3D.Pharmacophore.Pharmacophore
rdkit.Chem.PropertyMol.PropertyMol
rdkit.Chem.PyMol.MolViewer
rdkit.Chem.Recap.RecapHierarchyNode
rdkit.Chem.SaltRemover.SaltRemover
rdkit.Chem.Subshape.SubshapeAligner.SubshapeAligner
rdkit.Chem.Subshape.SubshapeAligner.SubshapeAlignment
rdkit.Chem.Subshape.SubshapeAligner.SubshapeDistanceMetric
rdkit.Chem.Subshape.SubshapeBuilder.SubshapeBuilder
rdkit.Chem.Subshape.SubshapeBuilder.SubshapeCombineOperations
rdkit.Chem.Subshape.SubshapeObjects.ShapeWithSkeleton
rdkit.Chem.Subshape.SubshapeObjects.SkeletonPoint
rdkit.Chem.Subshape.SubshapeObjects.SubshapeShape
rdkit.Chem.Suppliers.DbMolSupplier.DbMolSupplier
rdkit.Chem.Suppliers.DbMolSupplier.ForwardDbMolSupplier
rdkit.Chem.Suppliers.DbMolSupplier.RandomAccessDbMolSupplier
rdkit.Chem.Suppliers.MolSupplier.MolSupplier
rdkit.Chem.fmcs.fmcs.AtomSmartsNoAromaticity
rdkit.Chem.fmcs.fmcs.CachingTargetsMatcher
rdkit.Chem.fmcs.fmcs.CangenNode
rdkit.Chem.fmcs.fmcs.Default
rdkit.Chem.fmcs.fmcs.FragmentedTypedMolecule
rdkit.Chem.fmcs.fmcs.MCSResult
rdkit.Chem.fmcs.fmcs.SingleBestAtoms
rdkit.Chem.fmcs.fmcs.SingleBestAtomsCompleteRingsOnly
rdkit.Chem.fmcs.fmcs.SingleBestBonds
rdkit.Chem.fmcs.fmcs.SingleBestBondsCompleteRingsOnly
rdkit.Chem.fmcs.fmcs.Timer
rdkit.Chem.fmcs.fmcs.TypedFragment
rdkit.Chem.fmcs.fmcs.TypedMolecule
rdkit.Chem.fmcs.fmcs.Uniquer
rdkit.Chem.fmcs.fmcs.VerboseCachingTargetsMatcher
rdkit.Chem.fmcs.fmcs.VerboseHeapOps
rdkit.Chem.fmcs.fmcs._SingleBest
rdkit.Chem.fmcs.fmcs.starting_from
rdkit.DataStructs.BitEnsemble.BitEnsemble
rdkit.DataStructs.HierarchyVis.VisOpts
rdkit.DataStructs.LazySignature.LazySig
rdkit.DataStructs.TopNContainer.TopNContainer
rdkit.DataStructs.VectCollection.VectCollection
rdkit.Dbase.DbConnection.DbConnect
rdkit.Dbase.DbConnection.DbError
rdkit.Dbase.DbReport.CDXImageTransformer
rdkit.Dbase.DbReport.CactvsImageTransformer
rdkit.Dbase.DbReport.RDImageTransformer
rdkit.Dbase.DbReport.ReportLabImageTransformer
rdkit.Dbase.DbResultSet.DbResultBase
rdkit.Dbase.DbResultSet.DbResultSet
rdkit.Dbase.DbResultSet.RandomAccessDbResultSet
rdkit.ML.Cluster.ClusterVis.ClusterRenderer
rdkit.ML.Cluster.ClusterVis.VisOpts
rdkit.ML.Cluster.Clusters.Cluster
rdkit.ML.Composite.BayesComposite.BayesComposite
rdkit.ML.Composite.Composite.Composite
rdkit.ML.CompositeRun.CompositeRun
rdkit.ML.Data.MLData.MLDataSet
rdkit.ML.Data.MLData.MLQuantDataSet
rdkit.ML.DecTree.DecTree.DecTreeNode
rdkit.ML.DecTree.Forest.Forest
rdkit.ML.DecTree.QuantTree.QuantTreeNode
rdkit.ML.DecTree.SigTree.SigTreeNode
rdkit.ML.DecTree.Tree.TreeNode
rdkit.ML.DecTree.TreeVis.VisOpts
rdkit.ML.Descriptors.CompoundDescriptors.CompoundDescriptorCalculator
rdkit.ML.Descriptors.Descriptors.DescriptorCalculator
rdkit.ML.Descriptors.MoleculeDescriptors.MolecularDescriptorCalculator
rdkit.ML.InfoTheory.BitClusterer.BitClusterer
rdkit.ML.KNN.KNNClassificationModel.KNNClassificationModel
rdkit.ML.KNN.KNNModel.KNNModel
rdkit.ML.KNN.KNNRegressionModel.KNNRegressionModel
rdkit.ML.ModelPackage.Packager.ClassificationError
rdkit.ML.ModelPackage.Packager.DescriptorCalculationError
rdkit.ML.ModelPackage.Packager.ModelPackage
rdkit.ML.NaiveBayes.ClassificationModel.NaiveBayesClassifier
rdkit.ML.Neural.ActFuncs.ActFunc
rdkit.ML.Neural.ActFuncs.Sigmoid
rdkit.ML.Neural.ActFuncs.TanH
rdkit.ML.Neural.NetNode.NetNode
rdkit.ML.Neural.Network.Network
rdkit.ML.Neural.Trainers.BackProp
rdkit.ML.Neural.Trainers.Trainer
rdkit.ML.files.ReFile
rdkit.SimDivFilters.SimilarityPickers.GenericPicker
rdkit.SimDivFilters.SimilarityPickers.SpreadPicker
rdkit.SimDivFilters.SimilarityPickers.TopNOverallPicker
rdkit.VLib.Filter.FilterNode
rdkit.VLib.Node.VLibNode
rdkit.VLib.NodeLib.DbMolSupply.DbMolSupplyNode
rdkit.VLib.NodeLib.DbPickleSupplier.DbPickleSupplyNode
rdkit.VLib.NodeLib.DbPickleSupplier._lazyDataSeq
rdkit.VLib.NodeLib.SDSupply.SDSupplyNode
rdkit.VLib.NodeLib.SmartsMolFilter.SmartsFilter
rdkit.VLib.NodeLib.SmartsRemover.SmartsRemover
rdkit.VLib.NodeLib.SmilesDupeFilter.DupeFilter
rdkit.VLib.NodeLib.SmilesOutput.OutputNode
rdkit.VLib.NodeLib.SmilesSupply.SmilesSupplyNode
rdkit.VLib.Output.OutputNode
rdkit.VLib.Supply.SupplyNode
rdkit.VLib.Transform.TransformNode

All Functions

RDRandom.random
rdkit.Chem.AllChem.AssignBondOrdersFromTemplate
rdkit.Chem.AllChem.ComputeMolShape
rdkit.Chem.AllChem.ComputeMolVolume
rdkit.Chem.AllChem.ConstrainedEmbed
rdkit.Chem.AllChem.EnumerateLibraryFromReaction
rdkit.Chem.AllChem.GenerateDepictionMatching2DStructure
rdkit.Chem.AllChem.GenerateDepictionMatching3DStructure
rdkit.Chem.AllChem.GetBestRMS
rdkit.Chem.AllChem.GetConformerRMS
rdkit.Chem.AllChem.GetConformerRMSMatrix
rdkit.Chem.AllChem.TransformMol
rdkit.Chem.AllChem._test
rdkit.Chem.AtomPairs.Pairs.ExplainPairScore
rdkit.Chem.AtomPairs.Pairs.GetAtomPairFingerprintAsBitVect
rdkit.Chem.AtomPairs.Pairs._test
rdkit.Chem.AtomPairs.Pairs.pyScorePair
rdkit.Chem.AtomPairs.Sheridan.AssignPattyTypes
rdkit.Chem.AtomPairs.Sheridan.GetBPFingerprint
rdkit.Chem.AtomPairs.Sheridan.GetBTFingerprint
rdkit.Chem.AtomPairs.Sheridan._readPattyDefs
rdkit.Chem.AtomPairs.Sheridan._test
rdkit.Chem.AtomPairs.Torsions.ExplainPathScore
rdkit.Chem.AtomPairs.Torsions.GetTopologicalTorsionFingerprintAsIds
rdkit.Chem.AtomPairs.Torsions._test
rdkit.Chem.AtomPairs.Torsions.pyScorePath
rdkit.Chem.AtomPairs.Utils.BitsInCommon
rdkit.Chem.AtomPairs.Utils.CosineSimilarity
rdkit.Chem.AtomPairs.Utils.DiceSimilarity
rdkit.Chem.AtomPairs.Utils.Dot
rdkit.Chem.AtomPairs.Utils.ExplainAtomCode
rdkit.Chem.AtomPairs.Utils.NumPiElectrons
rdkit.Chem.AtomPairs.Utils._test
rdkit.Chem.BRICS.BRICSBuild
rdkit.Chem.BRICS.BRICSDecompose
rdkit.Chem.BRICS.BreakBRICSBonds
rdkit.Chem.BRICS.FindBRICSBonds
rdkit.Chem.BRICS._test
rdkit.Chem.BuildFragmentCatalog.BuildCatalog
rdkit.Chem.BuildFragmentCatalog.CalcGains
rdkit.Chem.BuildFragmentCatalog.CalcGainsFromFps
rdkit.Chem.BuildFragmentCatalog.OutputGainsData
rdkit.Chem.BuildFragmentCatalog.ParseArgs
rdkit.Chem.BuildFragmentCatalog.ProcessGainsData
rdkit.Chem.BuildFragmentCatalog.ScoreFromLists
rdkit.Chem.BuildFragmentCatalog.ScoreMolecules
rdkit.Chem.BuildFragmentCatalog.ShowDetails
rdkit.Chem.BuildFragmentCatalog.SupplierFromDetails
rdkit.Chem.BuildFragmentCatalog.Usage
rdkit.Chem.BuildFragmentCatalog.message
rdkit.Chem.CanonSmiles
rdkit.Chem.ChemUtils.AlignDepict.AlignDepict
rdkit.Chem.ChemUtils.BulkTester.TestMolecule
rdkit.Chem.ChemUtils.BulkTester.TestSupplier
rdkit.Chem.ChemUtils.SDFToCSV.Convert
rdkit.Chem.ChemUtils.SDFToCSV.Usage
rdkit.Chem.ChemUtils.TemplateExpand.ConstructSidechains
rdkit.Chem.ChemUtils.TemplateExpand.Explode
rdkit.Chem.ChemUtils.TemplateExpand.MoveDummyNeighborsToBeginning
rdkit.Chem.ChemUtils.TemplateExpand.Usage
rdkit.Chem.ChemUtils.TemplateExpand._exploder
rdkit.Chem.ChemicalFeatures.MCFF_GetFeaturesForMol
rdkit.Chem.Crippen._Init
rdkit.Chem.Crippen._ReadPatts
rdkit.Chem.Crippen._pyGetAtomContribs
rdkit.Chem.Crippen._pyMolLogP
rdkit.Chem.Crippen._pyMolMR
rdkit.Chem.Descriptors.MaxAbsPartialCharge
rdkit.Chem.Descriptors.MaxPartialCharge
rdkit.Chem.Descriptors.MinAbsPartialCharge
rdkit.Chem.Descriptors.MinPartialCharge
rdkit.Chem.Descriptors.NumRadicalElectrons
rdkit.Chem.Descriptors.NumValenceElectrons
rdkit.Chem.Descriptors._ChargeDescriptors
rdkit.Chem.Descriptors._isCallable
rdkit.Chem.Descriptors._setupDescriptors
rdkit.Chem.Descriptors._test
rdkit.Chem.Draw.IPythonConsole.InstallIPythonRenderer
rdkit.Chem.Draw.IPythonConsole.ShowMols
rdkit.Chem.Draw.IPythonConsole.UninstallIPythonRenderer
rdkit.Chem.Draw.IPythonConsole._GetSubstructMatch
rdkit.Chem.Draw.IPythonConsole._GetSubstructMatches
rdkit.Chem.Draw.IPythonConsole._toJSON
rdkit.Chem.Draw.IPythonConsole._toPNG
rdkit.Chem.Draw.IPythonConsole._toReactionPNG
rdkit.Chem.Draw.IPythonConsole._toSVG
rdkit.Chem.Draw.IPythonConsole.display_pil_image
rdkit.Chem.Draw.MolToFile
rdkit.Chem.Draw.MolToImage
rdkit.Chem.Draw.MolToImageFile
rdkit.Chem.Draw.MolToMPL
rdkit.Chem.Draw.MolToQPixmap
rdkit.Chem.Draw.MolsToGridImage
rdkit.Chem.Draw.MolsToImage
rdkit.Chem.Draw.ReactionToImage
rdkit.Chem.Draw.ShowMol
rdkit.Chem.Draw.SimilarityMaps.GetAPFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetAtomicWeightsForFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetAtomicWeightsForModel
rdkit.Chem.Draw.SimilarityMaps.GetMorganFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetRDKFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetSimilarityMapForFingerprint
rdkit.Chem.Draw.SimilarityMaps.GetSimilarityMapForModel
rdkit.Chem.Draw.SimilarityMaps.GetSimilarityMapFromWeights
rdkit.Chem.Draw.SimilarityMaps.GetStandardizedWeights
rdkit.Chem.Draw.SimilarityMaps.GetTTFingerprint
rdkit.Chem.Draw._MolsToGridImage
rdkit.Chem.Draw._MolsToGridSVG
rdkit.Chem.Draw._createCanvas
rdkit.Chem.Draw._getCanvas
rdkit.Chem.Draw._moltoimg
rdkit.Chem.Draw.aggCanvas.convertColor
rdkit.Chem.Draw.calcAtomGaussians
rdkit.Chem.Draw.spingCanvas.convertColor
rdkit.Chem.EState.AtomTypes.BuildPatts
rdkit.Chem.EState.AtomTypes.TypeAtoms
rdkit.Chem.EState.EState.EStateIndices
rdkit.Chem.EState.EState.GetPrincipleQuantumNumber
rdkit.Chem.EState.EState.MaxAbsEStateIndex
rdkit.Chem.EState.EState.MaxEStateIndex
rdkit.Chem.EState.EState.MinAbsEStateIndex
rdkit.Chem.EState.EState.MinEStateIndex
rdkit.Chem.EState.EState_VSA.EState_VSA_
rdkit.Chem.EState.EState_VSA.VSA_EState_
rdkit.Chem.EState.EState_VSA._InstallDescriptors
rdkit.Chem.EState.Fingerprinter.FingerprintMol
rdkit.Chem.FeatFinderCLI.GetAtomFeatInfo
rdkit.Chem.FeatMaps.FeatMapParser._test
rdkit.Chem.FeatMaps.FeatMapPoint._test
rdkit.Chem.FeatMaps.FeatMapUtils.CombineFeatMaps
rdkit.Chem.FeatMaps.FeatMapUtils.GetFeatFeatDistMatrix
rdkit.Chem.FeatMaps.FeatMapUtils.MergeFeatPoints
rdkit.Chem.FeatMaps.FeatMapUtils.__copyAll
rdkit.Chem.FeatMaps.FeatMapUtils._test
rdkit.Chem.FeatMaps.FeatMapUtils.familiesMatch
rdkit.Chem.FeatMaps.FeatMapUtils.feq
rdkit.Chem.FeatMaps.FeatMaps._test
rdkit.Chem.Features.FeatDirUtilsRD.ArbAxisRotation
rdkit.Chem.Features.FeatDirUtilsRD.GetAcceptor1FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetAcceptor2FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetAcceptor3FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetAromaticFeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetDonor1FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetDonor2FeatVects
rdkit.Chem.Features.FeatDirUtilsRD.GetDonor3FeatVects
rdkit.Chem.Features.FeatDirUtilsRD._GetTetrahedralFeatVect
rdkit.Chem.Features.FeatDirUtilsRD._checkPlanarity
rdkit.Chem.Features.FeatDirUtilsRD._findAvgVec
rdkit.Chem.Features.FeatDirUtilsRD._findHydAtoms
rdkit.Chem.Features.FeatDirUtilsRD.cross
rdkit.Chem.Features.FeatDirUtilsRD.findNeighbors
rdkit.Chem.Features.ShowFeats.ShowArrow
rdkit.Chem.Features.ShowFeats.ShowMolFeats
rdkit.Chem.Features.ShowFeats._buildCanonArrowhead
rdkit.Chem.Features.ShowFeats._cgoArrowhead
rdkit.Chem.Features.ShowFeats._getVectNormal
rdkit.Chem.FindMolChiralCenters
rdkit.Chem.Fingerprints.ClusterMols.ClusterFromDetails
rdkit.Chem.Fingerprints.ClusterMols.ClusterPoints
rdkit.Chem.Fingerprints.ClusterMols.GetDistanceMatrix
rdkit.Chem.Fingerprints.DbFpSupplier._test
rdkit.Chem.Fingerprints.DbFpSupplier.warning
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintMol
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromDetails
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromMols
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromPickles
rdkit.Chem.Fingerprints.FingerprintMols.FingerprintsFromSmiles
rdkit.Chem.Fingerprints.FingerprintMols.FoldFingerprintToTargetDensity
rdkit.Chem.Fingerprints.FingerprintMols.GetRDKFingerprint
rdkit.Chem.Fingerprints.FingerprintMols.ParseArgs
rdkit.Chem.Fingerprints.FingerprintMols.Usage
rdkit.Chem.Fingerprints.FingerprintMols.error
rdkit.Chem.Fingerprints.FingerprintMols.message
rdkit.Chem.Fingerprints.MolSimilarity.GetFingerprints
rdkit.Chem.Fingerprints.MolSimilarity.ScreenFingerprints
rdkit.Chem.Fingerprints.MolSimilarity.ScreenFromDetails
rdkit.Chem.Fingerprints.MolSimilarity.ScreenInDb
rdkit.Chem.Fingerprints.MolSimilarity._ConstructSQL
rdkit.Chem.Fraggle.FraggleSim.GetFraggleSimilarity
rdkit.Chem.Fraggle.FraggleSim._test
rdkit.Chem.Fraggle.FraggleSim.atomContrib
rdkit.Chem.Fraggle.FraggleSim.compute_fraggle_similarity_for_subs
rdkit.Chem.Fraggle.FraggleSim.delete_bonds
rdkit.Chem.Fraggle.FraggleSim.generate_fraggle_fragmentation
rdkit.Chem.Fraggle.FraggleSim.is_ring_cut_valid
rdkit.Chem.Fraggle.FraggleSim.select_fragments
rdkit.Chem.FragmentCatalog.BuildAdjacencyList
rdkit.Chem.FragmentCatalog.GetMolsMatchingBit
rdkit.Chem.FragmentCatalog.ProcessGainsFile
rdkit.Chem.FragmentCatalog.message
rdkit.Chem.FragmentMatcher._test
rdkit.Chem.Fragments._CountMatches
rdkit.Chem.Fragments._LoadPatterns
rdkit.Chem.FunctionalGroups.BuildFuncGroupHierarchy
rdkit.Chem.FunctionalGroups.CreateMolFingerprint
rdkit.Chem.FunctionalGroups._SetNodeBits
rdkit.Chem.GraphDescriptors.BalabanJ
rdkit.Chem.GraphDescriptors.BertzCT
rdkit.Chem.GraphDescriptors.Chi0
rdkit.Chem.GraphDescriptors.Chi1
rdkit.Chem.GraphDescriptors.Ipc
rdkit.Chem.GraphDescriptors._AssignSymmetryClasses
rdkit.Chem.GraphDescriptors._CalculateEntropies
rdkit.Chem.GraphDescriptors._CreateBondDictEtc
rdkit.Chem.GraphDescriptors._GetCountDict
rdkit.Chem.GraphDescriptors._LookUpBondOrder
rdkit.Chem.GraphDescriptors._NumAdjacencies
rdkit.Chem.GraphDescriptors._VertexDegrees
rdkit.Chem.GraphDescriptors._hkDeltas
rdkit.Chem.GraphDescriptors._log2
rdkit.Chem.GraphDescriptors._nVal
rdkit.Chem.GraphDescriptors._pyChi0n
rdkit.Chem.GraphDescriptors._pyChi0v
rdkit.Chem.GraphDescriptors._pyChi1n
rdkit.Chem.GraphDescriptors._pyChi1v
rdkit.Chem.GraphDescriptors._pyChi2n
rdkit.Chem.GraphDescriptors._pyChi2v
rdkit.Chem.GraphDescriptors._pyChi3n
rdkit.Chem.GraphDescriptors._pyChi3v
rdkit.Chem.GraphDescriptors._pyChi4n
rdkit.Chem.GraphDescriptors._pyChi4v
rdkit.Chem.GraphDescriptors._pyChiNn_
rdkit.Chem.GraphDescriptors._pyChiNv_
rdkit.Chem.GraphDescriptors._pyHallKierAlpha
rdkit.Chem.GraphDescriptors._pyKappa1
rdkit.Chem.GraphDescriptors._pyKappa2
rdkit.Chem.GraphDescriptors._pyKappa3
rdkit.Chem.Graphs.CharacteristicPolynomial
rdkit.Chem.Lipinski.HeavyAtomCount
rdkit.Chem.Lipinski._NumMatches
rdkit.Chem.MACCSkeys._InitKeys
rdkit.Chem.MACCSkeys._pyGenMACCSKeys
rdkit.Chem.MACCSkeys._test
rdkit.Chem.MCS.FindMCS
rdkit.Chem.MCS._test
rdkit.Chem.MolDb.FingerprintUtils.BuildAtomPairFP
rdkit.Chem.MolDb.FingerprintUtils.BuildMorganFP
rdkit.Chem.MolDb.FingerprintUtils.BuildPharm2DFP
rdkit.Chem.MolDb.FingerprintUtils.BuildRDKitFP
rdkit.Chem.MolDb.FingerprintUtils.BuildSigFactory
rdkit.Chem.MolDb.FingerprintUtils.BuildTorsionsFP
rdkit.Chem.MolDb.FingerprintUtils.DepickleFP
rdkit.Chem.MolDb.Loader_orig.ConvertRows
rdkit.Chem.MolDb.Loader_orig.LoadDb
rdkit.Chem.MolDb.Loader_orig.ProcessMol
rdkit.Chem.MolDb.Loader_sa.LoadDb
rdkit.Chem.MolDb.Loader_sa.ProcessMol
rdkit.Chem.MolDb.Loader_sa.RegisterSchema
rdkit.Chem.MolDb.Loader_sa._ConnectToSchema
rdkit.Chem.MolKey.InchiInfo._is_achiral_by_symmetry
rdkit.Chem.MolKey.MolKey.CheckCTAB
rdkit.Chem.MolKey.MolKey.ErrorBitsToText
rdkit.Chem.MolKey.MolKey.GetInchiForCTAB
rdkit.Chem.MolKey.MolKey.GetKeyForCTAB
rdkit.Chem.MolKey.MolKey._ctab_has_atoms
rdkit.Chem.MolKey.MolKey._ctab_remove_chiral_flag
rdkit.Chem.MolKey.MolKey._fix_all
rdkit.Chem.MolKey.MolKey._fix_chemdraw_header
rdkit.Chem.MolKey.MolKey._fix_line_ends
rdkit.Chem.MolKey.MolKey._get_bad_mol_identification_string
rdkit.Chem.MolKey.MolKey._get_chiral_identification_string
rdkit.Chem.MolKey.MolKey._get_identification_string
rdkit.Chem.MolKey.MolKey._get_null_mol_identification_string
rdkit.Chem.MolKey.MolKey._identify
rdkit.Chem.MolKey.MolKey._make_racemate_inchi
rdkit.Chem.MolKey.MolKey._test
rdkit.Chem.MolKey.MolKey.initStruchk
rdkit.Chem.MolSurf._InstallDescriptors
rdkit.Chem.MolSurf._LabuteHelper
rdkit.Chem.MolSurf._pyLabuteHelper
rdkit.Chem.MolSurf._pyTPSA
rdkit.Chem.MolSurf._pyTPSAContribs
rdkit.Chem.MolSurf.pyLabuteASA
rdkit.Chem.MolSurf.pyPEOE_VSA_
rdkit.Chem.MolSurf.pySMR_VSA_
rdkit.Chem.MolSurf.pySlogP_VSA_
rdkit.Chem.PandasTools.AddMoleculeColumnToFrame
rdkit.Chem.PandasTools.AddMurckoToFrame
rdkit.Chem.PandasTools.AlignMol
rdkit.Chem.PandasTools.AlignToScaffold
rdkit.Chem.PandasTools.ChangeMoleculeRendering
rdkit.Chem.PandasTools.FrameToGridImage
rdkit.Chem.PandasTools.LoadSDF
rdkit.Chem.PandasTools.PrintAsBase64PNGString
rdkit.Chem.PandasTools.PrintDefaultMolRep
rdkit.Chem.PandasTools.RemoveSaltsFromFrame
rdkit.Chem.PandasTools.RenderImagesInAllDataFrames
rdkit.Chem.PandasTools.SaveSMILESFromFrame
rdkit.Chem.PandasTools.SaveXlsxFromFrame
rdkit.Chem.PandasTools.WriteSDF
rdkit.Chem.PandasTools._MolPlusFingerprint
rdkit.Chem.PandasTools._get_image
rdkit.Chem.PandasTools._get_svg_image
rdkit.Chem.PandasTools._molge
rdkit.Chem.PandasTools.patchPandasHTMLrepr
rdkit.Chem.PandasTools.patchPandasHeadMethod
rdkit.Chem.Pharm2D.DefaultSigFactory
rdkit.Chem.Pharm2D.Generate.Gen2DFingerprint
rdkit.Chem.Pharm2D.Generate._ShortestPathsMatch
rdkit.Chem.Pharm2D.Gobbi_Pharm2D._init
rdkit.Chem.Pharm2D.Matcher.GetAtomsMatchingBit
rdkit.Chem.Pharm2D.Utils.BinsTriangleInequality
rdkit.Chem.Pharm2D.Utils.CountUpTo
rdkit.Chem.Pharm2D.Utils.GetAllCombinations
rdkit.Chem.Pharm2D.Utils.GetIndexCombinations
rdkit.Chem.Pharm2D.Utils.GetPossibleScaffolds
rdkit.Chem.Pharm2D.Utils.GetTriangles
rdkit.Chem.Pharm2D.Utils.GetUniqueCombinations
rdkit.Chem.Pharm2D.Utils.NumCombinations
rdkit.Chem.Pharm2D.Utils.OrderTriangle
rdkit.Chem.Pharm2D.Utils.ScaffoldPasses
rdkit.Chem.Pharm2D.Utils.UniquifyCombinations
rdkit.Chem.Pharm2D.Utils._fact
rdkit.Chem.Pharm2D.Utils._test
rdkit.Chem.Pharm3D.EmbedLib.AddExcludedVolumes
rdkit.Chem.Pharm3D.EmbedLib.Check2DBounds
rdkit.Chem.Pharm3D.EmbedLib.CoarseScreenPharmacophore
rdkit.Chem.Pharm3D.EmbedLib.CombiEnum
rdkit.Chem.Pharm3D.EmbedLib.ComputeChiralVolume
rdkit.Chem.Pharm3D.EmbedLib.ConstrainedEnum
rdkit.Chem.Pharm3D.EmbedLib.DownsampleBoundsMatrix
rdkit.Chem.Pharm3D.EmbedLib.EmbedMol
rdkit.Chem.Pharm3D.EmbedLib.EmbedOne
rdkit.Chem.Pharm3D.EmbedLib.EmbedPharmacophore
rdkit.Chem.Pharm3D.EmbedLib.GetAllPharmacophoreMatches
rdkit.Chem.Pharm3D.EmbedLib.GetAtomHeavyNeighbors
rdkit.Chem.Pharm3D.EmbedLib.MatchFeatsToMol
rdkit.Chem.Pharm3D.EmbedLib.MatchPharmacophore
rdkit.Chem.Pharm3D.EmbedLib.MatchPharmacophoreToMol
rdkit.Chem.Pharm3D.EmbedLib.OptimizeMol
rdkit.Chem.Pharm3D.EmbedLib.ReplaceGroup
rdkit.Chem.Pharm3D.EmbedLib.UpdatePharmacophoreBounds
rdkit.Chem.Pharm3D.EmbedLib._checkMatch
rdkit.Chem.Pharm3D.EmbedLib._getFeatDict
rdkit.Chem.Pharm3D.EmbedLib._test
rdkit.Chem.Pharm3D.EmbedLib.isNaN
rdkit.Chem.PropertyMol._test
rdkit.Chem.QuickSmartsMatch
rdkit.Chem.Randomize.CheckCanonicalization
rdkit.Chem.Randomize.RandomizeMol
rdkit.Chem.Randomize.RandomizeMolBlock
rdkit.Chem.Recap.RecapDecompose
rdkit.Chem.ReducedGraphs.TanimotoSimilarity
rdkit.Chem.SATIS.SATISTypes
rdkit.Chem.SaltRemover._test
rdkit.Chem.Scaffolds.MurckoScaffold.GetScaffoldForMol
rdkit.Chem.Scaffolds.MurckoScaffold.MakeScaffoldGeneric
rdkit.Chem.Scaffolds.MurckoScaffold.MurckoScaffoldSmiles
rdkit.Chem.Scaffolds.MurckoScaffold.MurckoScaffoldSmilesFromSmiles
rdkit.Chem.Scaffolds.MurckoScaffold._pyGetScaffoldForMol
rdkit.Chem.Scaffolds.MurckoScaffold._test
rdkit.Chem.SimpleEnum.Enumerator.EnumerateReaction
rdkit.Chem.SimpleEnum.Enumerator.PreprocessReaction
rdkit.Chem.SimpleEnum.Enumerator._test
rdkit.Chem.Subshape.BuilderUtils.AppendSkeletonPoints
rdkit.Chem.Subshape.BuilderUtils.AssignMolFeatsToPoints
rdkit.Chem.Subshape.BuilderUtils.CalculateDirectionsAtPoint
rdkit.Chem.Subshape.BuilderUtils.ClusterTerminalPts
rdkit.Chem.Subshape.BuilderUtils.ComputeGridIndices
rdkit.Chem.Subshape.BuilderUtils.ComputeShapeGridCentroid
rdkit.Chem.Subshape.BuilderUtils.ExpandTerminalPts
rdkit.Chem.Subshape.BuilderUtils.FindFarthestGridPoint
rdkit.Chem.Subshape.BuilderUtils.FindGridPointBetweenPoints
rdkit.Chem.Subshape.BuilderUtils.FindTerminalPtsFromConformer
rdkit.Chem.Subshape.BuilderUtils.FindTerminalPtsFromShape
rdkit.Chem.Subshape.BuilderUtils.GetMoreTerminalPoints
rdkit.Chem.Subshape.SubshapeAligner.ClusterAlignments
rdkit.Chem.Subshape.SubshapeAligner.GetShapeShapeDistance
rdkit.Chem.Subshape.SubshapeAligner.TransformMol
rdkit.Chem.Subshape.SubshapeAligner._getAllTriangles
rdkit.Chem.Subshape.SubshapeObjects.DisplaySubshape
rdkit.Chem.Subshape.SubshapeObjects.DisplaySubshapeSkeleton
rdkit.Chem.Subshape.SubshapeObjects._displaySubshapeSkelPt
rdkit.Chem.SupplierFromFilename
rdkit.Chem.Suppliers.DbMolSupplier.warning
rdkit.Chem.TemplateAlign.AlignMolToTemplate2D
rdkit.Chem.TemplateAlign._test
rdkit.Chem.TorsionFingerprints.CalculateTFD
rdkit.Chem.TorsionFingerprints.CalculateTorsionAngles
rdkit.Chem.TorsionFingerprints.CalculateTorsionLists
rdkit.Chem.TorsionFingerprints.CalculateTorsionWeights
rdkit.Chem.TorsionFingerprints.GetTFDBetweenConformers
rdkit.Chem.TorsionFingerprints.GetTFDBetweenMolecules
rdkit.Chem.TorsionFingerprints.GetTFDMatrix
rdkit.Chem.TorsionFingerprints._calculateBeta
rdkit.Chem.TorsionFingerprints._doMatch
rdkit.Chem.TorsionFingerprints._doMatchExcept1
rdkit.Chem.TorsionFingerprints._doNotMatch
rdkit.Chem.TorsionFingerprints._findCentralBond
rdkit.Chem.TorsionFingerprints._getAtomInvariantsWithRadius
rdkit.Chem.TorsionFingerprints._getBondsForTorsions
rdkit.Chem.TorsionFingerprints._getHeavyAtomNeighbors
rdkit.Chem.TorsionFingerprints._getIndexforTorsion
rdkit.Chem.TorsionFingerprints._getSameAtomOrder
rdkit.Chem.TorsionFingerprints._getTorsionAtomPositions
rdkit.Chem._test
rdkit.Chem.fmcs.fmcs.MATCH
rdkit.Chem.fmcs.fmcs._Counter
rdkit.Chem.fmcs.fmcs._MolToSDBlock
rdkit.Chem.fmcs.fmcs._check_atom_classes
rdkit.Chem.fmcs.fmcs._copy_sd_tags
rdkit.Chem.fmcs.fmcs._get_match_bond_indices
rdkit.Chem.fmcs.fmcs._get_nth_prime
rdkit.Chem.fmcs.fmcs._get_threshold_count
rdkit.Chem.fmcs.fmcs._save_other_tags
rdkit.Chem.fmcs.fmcs._update_times
rdkit.Chem.fmcs.fmcs.all_subgraph_extensions
rdkit.Chem.fmcs.fmcs.assign_isotopes_from_class_tag
rdkit.Chem.fmcs.fmcs.atom_typer_any
rdkit.Chem.fmcs.fmcs.atom_typer_elements
rdkit.Chem.fmcs.fmcs.atom_typer_isotopes
rdkit.Chem.fmcs.fmcs.bond_typer_any
rdkit.Chem.fmcs.fmcs.bond_typer_bondtypes
rdkit.Chem.fmcs.fmcs.canon
rdkit.Chem.fmcs.fmcs.check_completeRingsOnly
rdkit.Chem.fmcs.fmcs.compute_mcs
rdkit.Chem.fmcs.fmcs.convert_input_to_typed_molecules
rdkit.Chem.fmcs.fmcs.enumerate_subgraphs
rdkit.Chem.fmcs.fmcs.find_duplicates
rdkit.Chem.fmcs.fmcs.find_extension_size
rdkit.Chem.fmcs.fmcs.find_extensions
rdkit.Chem.fmcs.fmcs.find_upper_fragment_size_limits
rdkit.Chem.fmcs.fmcs.fmcs
rdkit.Chem.fmcs.fmcs.fragmented_mol_to_enumeration_mols
rdkit.Chem.fmcs.fmcs.gen_primes
rdkit.Chem.fmcs.fmcs.generate_smarts
rdkit.Chem.fmcs.fmcs.get_canonical_bondtype_counts
rdkit.Chem.fmcs.fmcs.get_canonical_bondtypes
rdkit.Chem.fmcs.fmcs.get_closure_label
rdkit.Chem.fmcs.fmcs.get_counts
rdkit.Chem.fmcs.fmcs.get_initial_cangen_nodes
rdkit.Chem.fmcs.fmcs.get_isotopes
rdkit.Chem.fmcs.fmcs.get_selected_atom_classes
rdkit.Chem.fmcs.fmcs.get_specified_types
rdkit.Chem.fmcs.fmcs.get_typed_fragment
rdkit.Chem.fmcs.fmcs.get_typed_molecule
rdkit.Chem.fmcs.fmcs.intersect_counts
rdkit.Chem.fmcs.fmcs.main
rdkit.Chem.fmcs.fmcs.make_arbitrary_smarts
rdkit.Chem.fmcs.fmcs.make_canonical_smarts
rdkit.Chem.fmcs.fmcs.make_complete_sdf
rdkit.Chem.fmcs.fmcs.make_fragment_sdf
rdkit.Chem.fmcs.fmcs.make_fragment_smiles
rdkit.Chem.fmcs.fmcs.make_structure_format
rdkit.Chem.fmcs.fmcs.nonempty_powerset
rdkit.Chem.fmcs.fmcs.parse_num_atoms
rdkit.Chem.fmcs.fmcs.parse_select
rdkit.Chem.fmcs.fmcs.parse_threshold
rdkit.Chem.fmcs.fmcs.parse_timeout
rdkit.Chem.fmcs.fmcs.powerset
rdkit.Chem.fmcs.fmcs.prune_maximize_atoms
rdkit.Chem.fmcs.fmcs.prune_maximize_bonds
rdkit.Chem.fmcs.fmcs.remove_unknown_bondtypes
rdkit.Chem.fmcs.fmcs.rerank
rdkit.Chem.fmcs.fmcs.restore_isotopes
rdkit.Chem.fmcs.fmcs.save_atom_classes
rdkit.Chem.fmcs.fmcs.save_isotopes
rdkit.Chem.fmcs.fmcs.set_isotopes
rdkit.Chem.fmcs.fmcs.subgraph_to_fragment
rdkit.DataStructs.BitEnsembleDb._InitScoreTable
rdkit.DataStructs.BitEnsembleDb._ScoreToDb
rdkit.DataStructs.BitUtils.ConstructEnsembleBV
rdkit.DataStructs.BitUtils._test
rdkit.DataStructs.FingerprintSimilarity
rdkit.DataStructs.FoldToTargetDensity
rdkit.DataStructs.HierarchyVis.DrawHierarchy
rdkit.DataStructs.HierarchyVis.GetMinCanvasSize
rdkit.DataStructs.LazySignature._test
rdkit.DataStructs.VectCollection._test
rdkit.Dbase.DbInfo.GetColumnInfoFromCursor
rdkit.Dbase.DbInfo.GetColumnNames
rdkit.Dbase.DbInfo.GetColumnNamesAndTypes
rdkit.Dbase.DbInfo.GetDbNames
rdkit.Dbase.DbInfo.GetTableNames
rdkit.Dbase.DbReport.GetReportlabTable
rdkit.Dbase.DbReport.QuickReport
rdkit.Dbase.DbUtils.DatabaseToDatabase
rdkit.Dbase.DbUtils.DatabaseToText
rdkit.Dbase.DbUtils.GetColumns
rdkit.Dbase.DbUtils.GetData
rdkit.Dbase.DbUtils.GetTypeStrings
rdkit.Dbase.DbUtils.TextFileToDatabase
rdkit.Dbase.DbUtils.TypeFinder
rdkit.Dbase.DbUtils._AddDataToDb
rdkit.Dbase.DbUtils._AdjustColHeadings
rdkit.Dbase.DbUtils._insertBlock
rdkit.Dbase.DbUtils._take
rdkit.Dbase.StorageUtils.GetNextId
rdkit.Dbase.StorageUtils.GetNextRDId
rdkit.Dbase.StorageUtils.IndexToRDId
rdkit.Dbase.StorageUtils.RDIdToInt
rdkit.Dbase.StorageUtils.RegisterItem
rdkit.Dbase.StorageUtils.RegisterItems
rdkit.Dbase.StorageUtils.ValidateRDId
rdkit.Dbase.StorageUtils._test
rdkit.ML.AnalyzeComposite.ErrorStats
rdkit.ML.AnalyzeComposite.ProcessIt
rdkit.ML.AnalyzeComposite.ShowStats
rdkit.ML.AnalyzeComposite.Usage
rdkit.ML.BuildComposite.GetCommandLine
rdkit.ML.BuildComposite.ParseArgs
rdkit.ML.BuildComposite.RunIt
rdkit.ML.BuildComposite.RunOnData
rdkit.ML.BuildComposite.SetDefaults
rdkit.ML.BuildComposite.ShowVersion
rdkit.ML.BuildComposite.Usage
rdkit.ML.BuildComposite.message
rdkit.ML.BuildComposite.testall
rdkit.ML.Cluster.Butina.ClusterData
rdkit.ML.Cluster.Butina.EuclideanDist
rdkit.ML.Cluster.ClusterUtils.FindClusterCentroidFromDists
rdkit.ML.Cluster.ClusterUtils.GetNodeList
rdkit.ML.Cluster.ClusterUtils.GetNodesDownToCentroids
rdkit.ML.Cluster.ClusterUtils.SplitIntoNClusters
rdkit.ML.Cluster.ClusterUtils._BreadthFirstSplit
rdkit.ML.Cluster.ClusterUtils._HeightFirstSplit
rdkit.ML.Cluster.ClusterVis.ClusterToImg
rdkit.ML.Cluster.ClusterVis.ClusterToPDF
rdkit.ML.Cluster.ClusterVis.ClusterToSVG
rdkit.ML.Cluster.ClusterVis.DrawClusterTree
rdkit.ML.Cluster.ClusterVis._DrawClusterTree
rdkit.ML.Cluster.ClusterVis._scaleMetric
rdkit.ML.Cluster.Murtagh.ClusterData
rdkit.ML.Cluster.Murtagh._LookupDist
rdkit.ML.Cluster.Murtagh._ToClusters
rdkit.ML.Cluster.Resemblance.CalcMetricMatrix
rdkit.ML.Cluster.Resemblance.EuclideanDistance
rdkit.ML.Cluster.Resemblance.FindMinValInList
rdkit.ML.Cluster.Resemblance.ShowMetricMat
rdkit.ML.Cluster.Standardize.StdDev
rdkit.ML.Composite.AdjustComposite.BalanceComposite
rdkit.ML.Composite.BayesComposite.BayesCompositeToComposite
rdkit.ML.Composite.BayesComposite.CompositeToBayesComposite
rdkit.ML.CompositeRun.SetDefaults
rdkit.ML.Data.DataUtils.BuildDataSet
rdkit.ML.Data.DataUtils.BuildQuantDataSet
rdkit.ML.Data.DataUtils.CalcNPossibleUsingMap
rdkit.ML.Data.DataUtils.CountResults
rdkit.ML.Data.DataUtils.DBToData
rdkit.ML.Data.DataUtils.FilterData
rdkit.ML.Data.DataUtils.InitRandomNumbers
rdkit.ML.Data.DataUtils.RandomizeActivities
rdkit.ML.Data.DataUtils.ReadGeneralExamples
rdkit.ML.Data.DataUtils.ReadQuantExamples
rdkit.ML.Data.DataUtils.ReadVars
rdkit.ML.Data.DataUtils.TakeEnsemble
rdkit.ML.Data.DataUtils.TextFileToData
rdkit.ML.Data.DataUtils.TextToData
rdkit.ML.Data.DataUtils.WriteData
rdkit.ML.Data.DataUtils.WritePickledData
rdkit.ML.Data.DataUtils._test
rdkit.ML.Data.DataUtils.permutation
rdkit.ML.Data.FindQuantBounds.Usage
rdkit.ML.Data.FindQuantBounds.runIt
rdkit.ML.Data.Quantize.FindVarMultQuantBounds
rdkit.ML.Data.Quantize.FindVarQuantBound
rdkit.ML.Data.Quantize._GenVarTable
rdkit.ML.Data.Quantize._NewPyFindStartPoints
rdkit.ML.Data.Quantize._NewPyRecurseOnBounds
rdkit.ML.Data.Quantize._PyRecurseOnBounds
rdkit.ML.Data.Quantize.feq
rdkit.ML.Data.SplitData.SplitDataSet
rdkit.ML.Data.SplitData.SplitDbData
rdkit.ML.Data.SplitData.SplitIndices
rdkit.ML.Data.SplitData._test
rdkit.ML.Data.Stats.FormCorrelationMatrix
rdkit.ML.Data.Stats.FormCovarianceMatrix
rdkit.ML.Data.Stats.GetConfidenceInterval
rdkit.ML.Data.Stats.MeanAndDev
rdkit.ML.Data.Stats.PrincipalComponents
rdkit.ML.Data.Stats.R2
rdkit.ML.Data.Stats.StandardizeMatrix
rdkit.ML.Data.Stats.TransformPoints
rdkit.ML.Data.Transforms.GetAvailTransforms
rdkit.ML.Data.Transforms._CenterTForm
rdkit.ML.Data.Transforms._NormalizeTForm
rdkit.ML.Data.Transforms._StandardTForm
rdkit.ML.DecTree.BuildQuantTree.BuildQuantTree
rdkit.ML.DecTree.BuildQuantTree.FindBest
rdkit.ML.DecTree.BuildQuantTree.QuantTreeBoot
rdkit.ML.DecTree.BuildQuantTree.TestQuantTree
rdkit.ML.DecTree.BuildQuantTree.TestQuantTree2
rdkit.ML.DecTree.BuildQuantTree.TestTree
rdkit.ML.DecTree.BuildSigTree.BuildSigTree
rdkit.ML.DecTree.BuildSigTree.SigTreeBuilder
rdkit.ML.DecTree.BuildSigTree._GenerateRandomEnsemble
rdkit.ML.DecTree.CrossValidate.ChooseOptimalRoot
rdkit.ML.DecTree.CrossValidate.CrossValidate
rdkit.ML.DecTree.CrossValidate.CrossValidationDriver
rdkit.ML.DecTree.CrossValidate.TestRun
rdkit.ML.DecTree.ID3.CalcTotalEntropy
rdkit.ML.DecTree.ID3.GenVarTable
rdkit.ML.DecTree.ID3.ID3
rdkit.ML.DecTree.ID3.ID3Boot
rdkit.ML.DecTree.PruneTree.MaxCount
rdkit.ML.DecTree.PruneTree.PruneTree
rdkit.ML.DecTree.PruneTree._GetLocalError
rdkit.ML.DecTree.PruneTree._Pruner
rdkit.ML.DecTree.PruneTree._testChain
rdkit.ML.DecTree.PruneTree._testRandom
rdkit.ML.DecTree.PruneTree._testSpecific
rdkit.ML.DecTree.TreeUtils.CollectDescriptorNames
rdkit.ML.DecTree.TreeUtils.CollectLabelLevels
rdkit.ML.DecTree.TreeUtils._test
rdkit.ML.DecTree.TreeVis.CalcTreeNodeSizes
rdkit.ML.DecTree.TreeVis.CalcTreeWidth
rdkit.ML.DecTree.TreeVis.DrawTree
rdkit.ML.DecTree.TreeVis.DrawTreeNode
rdkit.ML.DecTree.TreeVis.ResetTree
rdkit.ML.DecTree.TreeVis.SetNodeScales
rdkit.ML.DecTree.TreeVis._ApplyNodeScales
rdkit.ML.DecTree.TreeVis._ExampleCounter
rdkit.ML.DecTree.TreeVis._simpleTest
rdkit.ML.Descriptors.CompoundDescriptors.GetAllDescriptorNames
rdkit.ML.Descriptors.Parser.CalcMultipleCompoundsDescriptor
rdkit.ML.Descriptors.Parser.CalcSingleCompoundDescriptor
rdkit.ML.Descriptors.Parser.DEV
rdkit.ML.Descriptors.Parser.HAS
rdkit.ML.Descriptors.Parser.MAX
rdkit.ML.Descriptors.Parser.MEAN
rdkit.ML.Descriptors.Parser.MIN
rdkit.ML.Descriptors.Parser.SUM
rdkit.ML.Descriptors.Parser._SubForAtomicVars
rdkit.ML.Descriptors.Parser._SubForCompoundDescriptors
rdkit.ML.Descriptors.Parser._SubMethodArgs
rdkit.ML.EnrichPlot.AccumulateCounts
rdkit.ML.EnrichPlot.MakePlot
rdkit.ML.EnrichPlot.ScreenModel
rdkit.ML.EnrichPlot.Usage
rdkit.ML.EnrichPlot.error
rdkit.ML.EnrichPlot.message
rdkit.ML.GrowComposite.BalanceComposite
rdkit.ML.GrowComposite.GetComposites
rdkit.ML.GrowComposite.GrowIt
rdkit.ML.GrowComposite.ParseArgs
rdkit.ML.GrowComposite.SetDefaults
rdkit.ML.GrowComposite.ShowVersion
rdkit.ML.GrowComposite.Usage
rdkit.ML.GrowComposite.message
rdkit.ML.InfoTheory.BitRank.AnalyzeSparseVects
rdkit.ML.InfoTheory.BitRank.CalcInfoGains
rdkit.ML.InfoTheory.BitRank.FormCounts
rdkit.ML.InfoTheory.BitRank.RankBits
rdkit.ML.InfoTheory.BitRank.SparseRankBits
rdkit.ML.InfoTheory.entropy.PyInfoEntropy
rdkit.ML.InfoTheory.entropy.PyInfoGain
rdkit.ML.KNN.CrossValidate.CrossValidate
rdkit.ML.KNN.CrossValidate.CrossValidationDriver
rdkit.ML.KNN.CrossValidate.makeClassificationModel
rdkit.ML.KNN.CrossValidate.makeRegressionModel
rdkit.ML.KNN.DistFunctions.EuclideanDist
rdkit.ML.KNN.DistFunctions.TanimotoDist
rdkit.ML.KNN.DistFunctions._test
rdkit.ML.MLUtils.VoteImg.BuildVoteImage
rdkit.ML.MLUtils.VoteImg.CollectVotes
rdkit.ML.MLUtils.VoteImg.Usage
rdkit.ML.MLUtils.VoteImg.VoteAndBuildImage
rdkit.ML.ModelPackage.PackageUtils.PackageToXml
rdkit.ML.ModelPackage.PackageUtils._ConvertModelPerformance
rdkit.ML.NaiveBayes.ClassificationModel._getBinId
rdkit.ML.NaiveBayes.CrossValidate.CrossValidate
rdkit.ML.NaiveBayes.CrossValidate.CrossValidationDriver
rdkit.ML.NaiveBayes.CrossValidate.makeNBClassificationModel
rdkit.ML.Neural.CrossValidate.CrossValidate
rdkit.ML.Neural.CrossValidate.CrossValidationDriver
rdkit.ML.SLT.Risk.BurgesRiskBound
rdkit.ML.SLT.Risk.CherkasskyRiskBound
rdkit.ML.SLT.Risk.CristianiRiskBound
rdkit.ML.SLT.Risk.log2
rdkit.ML.Scoring.Scoring.CalcAUC
rdkit.ML.Scoring.Scoring.CalcBEDROC
rdkit.ML.Scoring.Scoring.CalcEnrichment
rdkit.ML.Scoring.Scoring.CalcRIE
rdkit.ML.Scoring.Scoring.CalcROC
rdkit.ML.Scoring.Scoring._RIEHelper
rdkit.ML.ScreenComposite.CalcEnrichment
rdkit.ML.ScreenComposite.CollectResults
rdkit.ML.ScreenComposite.DetailedScreen
rdkit.ML.ScreenComposite.GetScreenImage
rdkit.ML.ScreenComposite.Go
rdkit.ML.ScreenComposite.MakePredPlot
rdkit.ML.ScreenComposite.ParseArgs
rdkit.ML.ScreenComposite.PrepareDataFromDetails
rdkit.ML.ScreenComposite.ScreenFromDetails
rdkit.ML.ScreenComposite.ScreenIt
rdkit.ML.ScreenComposite.ScreenToHtml
rdkit.ML.ScreenComposite.SetDefaults
rdkit.ML.ScreenComposite.ShowVersion
rdkit.ML.ScreenComposite.ShowVoteResults
rdkit.ML.ScreenComposite.Usage
rdkit.ML.ScreenComposite._processVoteList
rdkit.ML.ScreenComposite.error
rdkit.ML.ScreenComposite.message
rdkit.ML.files.ReadDataFile
rdkit.SimDivFilters.SimilarityPickers._test
rdkit.VLib.Filter._test
rdkit.VLib.Node._test
rdkit.VLib.NodeLib.DbMolSupply.GetNode
rdkit.VLib.NodeLib.DbMolSupply._test
rdkit.VLib.NodeLib.DbPickleSupplier.GetNode
rdkit.VLib.NodeLib.DbPickleSupplier._test
rdkit.VLib.NodeLib.SDSupply._test
rdkit.VLib.NodeLib.SmartsMolFilter._test
rdkit.VLib.NodeLib.SmartsRemover._test
rdkit.VLib.NodeLib.SmilesDupeFilter._test
rdkit.VLib.NodeLib.SmilesOutput._test
rdkit.VLib.NodeLib.SmilesSupply._test
rdkit.VLib.Output._test
rdkit.VLib.Supply._test
rdkit.VLib.Transform._test

All Variables

RDRandom.__package__
rdkit.Chem.AllChem.logger
rdkit.Chem.AtomPairs.Pairs.GetAtomPairFingerprintAsIntVect
rdkit.Chem.AtomPairs.Pairs._maxPathLen
rdkit.Chem.AtomPairs.Pairs.fpLen
rdkit.Chem.AtomPairs.Pairs.numFpBits
rdkit.Chem.AtomPairs.Pairs.numPathBits
rdkit.Chem.AtomPairs.Sheridan._maxPathLen
rdkit.Chem.AtomPairs.Sheridan._pattyDefs
rdkit.Chem.AtomPairs.Sheridan.fpLen
rdkit.Chem.AtomPairs.Sheridan.numFpBits
rdkit.Chem.AtomPairs.Sheridan.numPathBits
rdkit.Chem.AtomPairs.Sheridan.typMap
rdkit.Chem.AtomPairs.Torsions.GetTopologicalTorsionFingerprintAsIntVect
rdkit.Chem.AtomPairs.Utils.GetAtomCode
rdkit.Chem.BRICS.bondMatchers
rdkit.Chem.BRICS.dummyPattern
rdkit.Chem.BRICS.environMatchers
rdkit.Chem.BRICS.environs
rdkit.Chem.BRICS.reactionDefs
rdkit.Chem.BRICS.reactions
rdkit.Chem.BRICS.reverseReactions
rdkit.Chem.BRICS.smartsGps
rdkit.Chem.BuildFragmentCatalog.__VERSION_STRING
rdkit.Chem.BuildFragmentCatalog._cvsVersion
rdkit.Chem.BuildFragmentCatalog.idx1
rdkit.Chem.BuildFragmentCatalog.idx2
rdkit.Chem.ChemUtils.TemplateExpand._greet
rdkit.Chem.ChemUtils.TemplateExpand._usage
rdkit.Chem.ChemUtils.TemplateExpand._version
rdkit.Chem.ChemUtils.TemplateExpand.logger
rdkit.Chem.ChemUtils.TemplateExpand.nDumped
rdkit.Chem.Crippen.MolLogP
rdkit.Chem.Crippen.MolMR
rdkit.Chem.Crippen._GetAtomContribs
rdkit.Chem.Crippen._patternOrder
rdkit.Chem.Crippen._smartsPatterns
rdkit.Chem.Crippen.defaultPatternFileName
rdkit.Chem.DSViewer._nextDisplayId
rdkit.Chem.Descriptors.ExactMolWt
rdkit.Chem.Descriptors.HeavyAtomMolWt
rdkit.Chem.Descriptors.MolWt
rdkit.Chem.Descriptors._descList
rdkit.Chem.Draw.IPythonConsole._MolsToGridImageSaved
rdkit.Chem.Draw.IPythonConsole._canUse3D
rdkit.Chem.Draw.IPythonConsole.camera_type_3d
rdkit.Chem.Draw.IPythonConsole.drawing_type_3d
rdkit.Chem.Draw.IPythonConsole.highlightSubstructs
rdkit.Chem.Draw.IPythonConsole.ipython_3d
rdkit.Chem.Draw.IPythonConsole.ipython_useSVG
rdkit.Chem.Draw.IPythonConsole.kekulizeStructures
rdkit.Chem.Draw.IPythonConsole.molSize
rdkit.Chem.Draw.IPythonConsole.molSize_3d
rdkit.Chem.Draw.IPythonConsole.shader_3d
rdkit.Chem.Draw.MolDrawing.periodicTable
rdkit.Chem.Draw.SimilarityMaps.apDict
rdkit.Chem.Draw.SimilarityMaps.ttDict
rdkit.Chem.Draw.aggCanvas.faceMap
rdkit.Chem.Draw.cairoCanvas.pango
rdkit.Chem.Draw.cairoCanvas.pangocairo
rdkit.Chem.Draw.cairoCanvas.scriptPattern
rdkit.Chem.Draw.spingCanvas.faceMap
rdkit.Chem.Draw.tkLabel
rdkit.Chem.Draw.tkPI
rdkit.Chem.Draw.tkRoot
rdkit.Chem.EState.AtomTypes._rawD
rdkit.Chem.EState.AtomTypes.esPatterns
rdkit.Chem.EState.EState_VSA.estateBins
rdkit.Chem.EState.EState_VSA.vsaBins
rdkit.Chem.FeatFinderCLI._splashMessage
rdkit.Chem.FeatFinderCLI._version
rdkit.Chem.FeatFinderCLI.logger
rdkit.Chem.FeatFinderCLI.splitExpr
rdkit.Chem.Features.ShowFeats.ALPHA
rdkit.Chem.Features.ShowFeats.BEGIN
rdkit.Chem.Features.ShowFeats.COLOR
rdkit.Chem.Features.ShowFeats.CYLINDER
rdkit.Chem.Features.ShowFeats.END
rdkit.Chem.Features.ShowFeats.NORMAL
rdkit.Chem.Features.ShowFeats.SPHERE
rdkit.Chem.Features.ShowFeats.TRIANGLE_FAN
rdkit.Chem.Features.ShowFeats.VERTEX
rdkit.Chem.Features.ShowFeats._canonArrowhead
rdkit.Chem.Features.ShowFeats._featColors
rdkit.Chem.Features.ShowFeats._globalArrowCGO
rdkit.Chem.Features.ShowFeats._globalSphereCGO
rdkit.Chem.Features.ShowFeats._usage
rdkit.Chem.Features.ShowFeats._version
rdkit.Chem.Features.ShowFeats._welcomeMessage
rdkit.Chem.Features.ShowFeats.logger
rdkit.Chem.Features.ShowFeats.parser
rdkit.Chem.Fingerprints.ClusterMols.__VERSION_STRING
rdkit.Chem.Fingerprints.ClusterMols._cvsVersion
rdkit.Chem.Fingerprints.ClusterMols._usageDoc
rdkit.Chem.Fingerprints.ClusterMols.idx1
rdkit.Chem.Fingerprints.ClusterMols.idx2
rdkit.Chem.Fingerprints.FingerprintMols.__VERSION_STRING
rdkit.Chem.Fingerprints.FingerprintMols._cvsVersion
rdkit.Chem.Fingerprints.FingerprintMols._usageDoc
rdkit.Chem.Fingerprints.FingerprintMols.idx1
rdkit.Chem.Fingerprints.FingerprintMols.idx2
rdkit.Chem.Fingerprints.MolSimilarity.__VERSION_STRING
rdkit.Chem.Fingerprints.MolSimilarity._cvsVersion
rdkit.Chem.Fingerprints.MolSimilarity._dataSeq
rdkit.Chem.Fingerprints.MolSimilarity._usageDoc
rdkit.Chem.Fingerprints.MolSimilarity.idx1
rdkit.Chem.Fingerprints.MolSimilarity.idx2
rdkit.Chem.Fraggle.FraggleSim.acyc_smarts
rdkit.Chem.Fraggle.FraggleSim.cSma1
rdkit.Chem.Fraggle.FraggleSim.cSma2
rdkit.Chem.Fraggle.FraggleSim.cyc_smarts
rdkit.Chem.Fraggle.FraggleSim.modified_query_fps
rdkit.Chem.Fraggle.FraggleSim.rdkitFpParams
rdkit.Chem.Fragments.defaultPatternFileName
rdkit.Chem.Fragments.fn
rdkit.Chem.Fragments.fns
rdkit.Chem.FunctionalGroups.groupDefns
rdkit.Chem.FunctionalGroups.hierarchy
rdkit.Chem.FunctionalGroups.lastData
rdkit.Chem.FunctionalGroups.lastFilename
rdkit.Chem.GraphDescriptors.Chi0n
rdkit.Chem.GraphDescriptors.Chi0v
rdkit.Chem.GraphDescriptors.Chi1n
rdkit.Chem.GraphDescriptors.Chi1v
rdkit.Chem.GraphDescriptors.Chi2n
rdkit.Chem.GraphDescriptors.Chi2v
rdkit.Chem.GraphDescriptors.Chi3n
rdkit.Chem.GraphDescriptors.Chi3v
rdkit.Chem.GraphDescriptors.Chi4n
rdkit.Chem.GraphDescriptors.Chi4v
rdkit.Chem.GraphDescriptors.ChiNn_
rdkit.Chem.GraphDescriptors.ChiNv_
rdkit.Chem.GraphDescriptors.HallKierAlpha
rdkit.Chem.GraphDescriptors.Kappa1
rdkit.Chem.GraphDescriptors.Kappa2
rdkit.Chem.GraphDescriptors.Kappa3
rdkit.Chem.GraphDescriptors._log2val
rdkit.Chem.GraphDescriptors.periodicTable
rdkit.Chem.Lipinski.HAcceptorSmarts
rdkit.Chem.Lipinski.HDonorSmarts
rdkit.Chem.Lipinski.HeteroatomSmarts
rdkit.Chem.Lipinski.NHOHCount
rdkit.Chem.Lipinski.NHOHSmarts
rdkit.Chem.Lipinski.NOCount
rdkit.Chem.Lipinski.NOCountSmarts
rdkit.Chem.Lipinski.NumHAcceptors
rdkit.Chem.Lipinski.NumHDonors
rdkit.Chem.Lipinski.NumHeteroatoms
rdkit.Chem.Lipinski.NumRotatableBonds
rdkit.Chem.Lipinski.RingCount
rdkit.Chem.Lipinski.RotatableBondSmarts
rdkit.Chem.Lipinski._HAcceptors
rdkit.Chem.Lipinski._HDonors
rdkit.Chem.Lipinski._Heteroatoms
rdkit.Chem.Lipinski._RotatableBonds
rdkit.Chem.Lipinski._bulkConvert
rdkit.Chem.MACCSkeys.FingerprintMol
rdkit.Chem.MACCSkeys.GenMACCSKeys
rdkit.Chem.MACCSkeys.maccsKeys
rdkit.Chem.MACCSkeys.smartsPatts
rdkit.Chem.MolDb.FingerprintUtils.similarityMethods
rdkit.Chem.MolDb.FingerprintUtils.supportedSimilarityMethods
rdkit.Chem.MolDb.Loader_orig.logger
rdkit.Chem.MolDb.Loader_sa.decBase
rdkit.Chem.MolDb.Loader_sa.logger
rdkit.Chem.MolKey.InchiInfo.ACETATE
rdkit.Chem.MolKey.InchiInfo.ACETIC_ACID
rdkit.Chem.MolKey.InchiInfo.DEUTERATED_UREA
rdkit.Chem.MolKey.InchiInfo.GUANINE
rdkit.Chem.MolKey.InchiInfo.TRITIATED_UREA
rdkit.Chem.MolKey.InchiInfo.UPD_APP
rdkit.Chem.MolKey.InchiInfo.UREA1
rdkit.Chem.MolKey.InchiInfo.UREA2
rdkit.Chem.MolKey.InchiInfo.all_stereo_re
rdkit.Chem.MolKey.InchiInfo.console
rdkit.Chem.MolKey.InchiInfo.defined_stereo_re
rdkit.Chem.MolKey.InchiInfo.fixed_h_re
rdkit.Chem.MolKey.InchiInfo.h_layer_re
rdkit.Chem.MolKey.InchiInfo.isotope_re
rdkit.Chem.MolKey.InchiInfo.mobile1
rdkit.Chem.MolKey.InchiInfo.mobile2
rdkit.Chem.MolKey.InchiInfo.mobile_h_atoms_re
rdkit.Chem.MolKey.InchiInfo.mobile_h_group_re
rdkit.Chem.MolKey.InchiInfo.reconnected_re
rdkit.Chem.MolKey.InchiInfo.sp3_unk
rdkit.Chem.MolKey.InchiInfo.stereo_all_re
rdkit.Chem.MolKey.InchiInfo.stereo_re
rdkit.Chem.MolKey.InchiInfo.sugar1
rdkit.Chem.MolKey.InchiInfo.sugar2
rdkit.Chem.MolKey.InchiInfo.undef_stereo_re
rdkit.Chem.MolKey.InchiInfo.version_re
rdkit.Chem.MolKey.MolKey.BAD_SET
rdkit.Chem.MolKey.MolKey.CHIRAL_POS
rdkit.Chem.MolKey.MolKey.ERROR_DICT
rdkit.Chem.MolKey.MolKey.GET_STEREO_RE
rdkit.Chem.MolKey.MolKey.INCHI_COMPUTATION_ERROR
rdkit.Chem.MolKey.MolKey.INCHI_READWRITE_ERROR
rdkit.Chem.MolKey.MolKey.InchiResult
rdkit.Chem.MolKey.MolKey.MOL_KEY_VERSION
rdkit.Chem.MolKey.MolKey.MolKeyResult
rdkit.Chem.MolKey.MolKey.NULL_MOL
rdkit.Chem.MolKey.MolKey.NULL_SMILES_RE
rdkit.Chem.MolKey.MolKey.PATTERN_NULL_MOL
rdkit.Chem.MolKey.MolKey.RDKIT_CONVERSION_ERROR
rdkit.Chem.MolKey.MolKey.T_NULL_MOL
rdkit.Chem.MolKey.MolKey.__initCalled
rdkit.Chem.MolKey.MolKey.stereo_code_dict
rdkit.Chem.MolSurf.LabuteASA
rdkit.Chem.MolSurf.PEOE_VSA_
rdkit.Chem.MolSurf.SMR_VSA_
rdkit.Chem.MolSurf.SlogP_VSA_
rdkit.Chem.MolSurf.TPSA
rdkit.Chem.MolSurf.bondScaleFacts
rdkit.Chem.MolSurf.chgBins
rdkit.Chem.MolSurf.logpBins
rdkit.Chem.MolSurf.mrBins
rdkit.Chem.MolSurf.radCol
rdkit.Chem.PandasTools._fingerprinter
rdkit.Chem.PandasTools._saltRemover
rdkit.Chem.PandasTools.defPandasRendering
rdkit.Chem.PandasTools.highlightSubstructures
rdkit.Chem.PandasTools.molRepresentation
rdkit.Chem.PandasTools.molSize
rdkit.Chem.PandasTools.pd
rdkit.Chem.PandasTools.v
rdkit.Chem.PeriodicTable.hallKierAlphas
rdkit.Chem.PeriodicTable.metalNames
rdkit.Chem.PeriodicTable.metalNumList
rdkit.Chem.PeriodicTable.metalRanges
rdkit.Chem.PeriodicTable.nameTable
rdkit.Chem.PeriodicTable.numTable
rdkit.Chem.PeriodicTable.periodicData
rdkit.Chem.Pharm2D.Generate._verbose
rdkit.Chem.Pharm2D.Generate.logger
rdkit.Chem.Pharm2D.Gobbi_Pharm2D.defaultBins
rdkit.Chem.Pharm2D.Gobbi_Pharm2D.fdef
rdkit.Chem.Pharm2D.Matcher._verbose
rdkit.Chem.Pharm2D.SigFactory._verbose
rdkit.Chem.Pharm2D.Utils._countCache
rdkit.Chem.Pharm2D.Utils._indexCombinations
rdkit.Chem.Pharm2D.Utils._numCombDict
rdkit.Chem.Pharm2D.Utils._trianglesInPharmacophore
rdkit.Chem.Pharm2D.Utils._verbose
rdkit.Chem.Pharm2D.Utils.nDistPointDict
rdkit.Chem.Pharm2D.Utils.nPointDistDict
rdkit.Chem.Pharm3D.EmbedLib._times
rdkit.Chem.Pharm3D.EmbedLib.defaultFeatLength
rdkit.Chem.Pharm3D.EmbedLib.logger
rdkit.Chem.Pharm3D.Pharmacophore.logger
rdkit.Chem.PyMol._server
rdkit.Chem.Recap.reactionDefs
rdkit.Chem.Recap.reactions
rdkit.Chem.SATIS._debug
rdkit.Chem.SATIS.aldehydePatt
rdkit.Chem.SATIS.amidePatt
rdkit.Chem.SATIS.carboxylPatt
rdkit.Chem.SATIS.carboxylatePatt
rdkit.Chem.SATIS.esterPatt
rdkit.Chem.SATIS.ketonePatt
rdkit.Chem.SATIS.specialCases
rdkit.Chem.Scaffolds.MurckoScaffold.aromaticNTransform
rdkit.Chem.Scaffolds.MurckoScaffold.murckoPatts
rdkit.Chem.Scaffolds.MurckoScaffold.murckoQ
rdkit.Chem.Scaffolds.MurckoScaffold.murckoTransforms
rdkit.Chem.Subshape.SubshapeAligner.logger
rdkit.Chem._HasSubstructMatchStr
rdkit.Chem.fmcs.fmcs.Atom
rdkit.Chem.fmcs.fmcs.Bond
rdkit.Chem.fmcs.fmcs.DirectedEdge
rdkit.Chem.fmcs.fmcs.EnumerationMolecule
rdkit.Chem.fmcs.fmcs.OutgoingEdge
rdkit.Chem.fmcs.fmcs.Subgraph
rdkit.Chem.fmcs.fmcs.__version_info
rdkit.Chem.fmcs.fmcs._atom_class_dict
rdkit.Chem.fmcs.fmcs._atom_smarts_no_aromaticity
rdkit.Chem.fmcs.fmcs._available_closures
rdkit.Chem.fmcs.fmcs._get_symbol
rdkit.Chem.fmcs.fmcs._isotope_dict
rdkit.Chem.fmcs.fmcs._maximize_options
rdkit.Chem.fmcs.fmcs._prime_stream
rdkit.Chem.fmcs.fmcs._primes
rdkit.Chem.fmcs.fmcs.atom_typers
rdkit.Chem.fmcs.fmcs.bond_typers
rdkit.Chem.fmcs.fmcs.compare_shortcuts
rdkit.Chem.fmcs.fmcs.default_atom_typer
rdkit.Chem.fmcs.fmcs.default_bond_typer
rdkit.Chem.fmcs.fmcs.range_pat
rdkit.Chem.fmcs.fmcs.structure_format_functions
rdkit.Chem.fmcs.fmcs.tiebreaker
rdkit.Chem.fmcs.fmcs.value_pat
rdkit.Chem.inchi.INCHI_AVAILABLE
rdkit.DataStructs.HierarchyVis.visOpts
rdkit.DataStructs.__doc__
rdkit.DataStructs.similarityFunctions
rdkit.Dbase.DbInfo.sqlBinTypes
rdkit.Dbase.DbInfo.sqlFloatTypes
rdkit.Dbase.DbInfo.sqlIntTypes
rdkit.Dbase.DbInfo.sqlTextTypes
rdkit.Dbase.DbModule.RDTestDatabase
rdkit.Dbase.DbModule.binaryHolder
rdkit.Dbase.DbModule.binaryTypeName
rdkit.Dbase.DbModule.connect
rdkit.Dbase.DbModule.dbFileWildcard
rdkit.Dbase.DbModule.fileWildcard
rdkit.Dbase.DbModule.getDbSql
rdkit.Dbase.DbModule.getTablesAndViewsSql
rdkit.Dbase.DbModule.getTablesSql
rdkit.Dbase.DbModule.placeHolder
rdkit.Dbase.DbModule.sqlBinTypes
rdkit.Dbase.DbModule.sqlFloatTypes
rdkit.Dbase.DbModule.sqlIntTypes
rdkit.Dbase.DbModule.sqlTextTypes
rdkit.Dbase.DbReport.hasCDX
rdkit.Dbase.StorageUtils.__test__
rdkit.Dbase.StorageUtils._roundtripTests
rdkit.ML.AnalyzeComposite.__VERSION_STRING
rdkit.ML.BuildComposite.__VERSION_STRING
rdkit.ML.BuildComposite._runDetails
rdkit.ML.BuildComposite._verbose
rdkit.ML.Cluster.Butina.logger
rdkit.ML.Cluster.Clusters.CMPTOL
rdkit.ML.Cluster.Murtagh.CENTROID
rdkit.ML.Cluster.Murtagh.CLINK
rdkit.ML.Cluster.Murtagh.GOWER
rdkit.ML.Cluster.Murtagh.MCQUITTY
rdkit.ML.Cluster.Murtagh.SLINK
rdkit.ML.Cluster.Murtagh.UPGMA
rdkit.ML.Cluster.Murtagh.WARDS
rdkit.ML.Cluster.Murtagh.methods
rdkit.ML.Cluster.Resemblance.methods
rdkit.ML.Cluster.Standardize.methods
rdkit.ML.Data.MLData.numericTypes
rdkit.ML.Data.Quantize._float_tol
rdkit.ML.Data.Quantize.hascQuantize
rdkit.ML.Data.SplitData.SeqTypes
rdkit.ML.Data.Stats.tConfs
rdkit.ML.Data.Stats.tTable
rdkit.ML.Data.Transforms._availTransforms
rdkit.ML.DecTree.BuildSigTree.CMIM
rdkit.ML.DecTree.PruneTree._verbose
rdkit.ML.DecTree.TreeUtils.__test__
rdkit.ML.DecTree.TreeUtils._test1
rdkit.ML.DecTree.TreeVis.visOpts
rdkit.ML.Descriptors.CompoundDescriptors.countOptions
rdkit.ML.Descriptors.MoleculeDescriptors.logger
rdkit.ML.Descriptors.Parser.__DEBUG
rdkit.ML.Descriptors.Parser.knownMethods
rdkit.ML.EnrichPlot.__VERSION_STRING
rdkit.ML.GrowComposite.__VERSION_STRING
rdkit.ML.GrowComposite._runDetails
rdkit.ML.GrowComposite._verbose
rdkit.ML.InfoTheory.entropy._log2
rdkit.ML.InfoTheory.entropy.hascEntropy
rdkit.ML.NaiveBayes.CrossValidate.CMIM
rdkit.ML.ScreenComposite.__VERSION_STRING
rdkit.ML.ScreenComposite._details
rdkit.ML.ScreenComposite.hasPil
rdkit.SimDivFilters.rdSimDivPickers
rdkit.VLib.NodeLib.DbPickleSupplier._dataSeq
rdkit.VLib.NodeLib.SmartsRemover.__test__
rdkit.VLib.NodeLib.SmartsRemover.biggerTest
rdkit.VLib.NodeLib.demo.atsFilter
rdkit.VLib.NodeLib.demo.dupeFilter
rdkit.VLib.NodeLib.demo.io
rdkit.VLib.NodeLib.demo.metals
rdkit.VLib.NodeLib.demo.mols
rdkit.VLib.NodeLib.demo.output
rdkit.VLib.NodeLib.demo.remover
rdkit.VLib.NodeLib.demo.salts
rdkit.VLib.NodeLib.demo.smaFilter
rdkit.VLib.NodeLib.demo.smis
rdkit.VLib.NodeLib.demo.supplier

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